ggKbase home page

ar4r2_scaffold_7604_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3509..4396)

Top 3 Functional Annotations

Value Algorithm Source
Tex-like protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BP52_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 259.0
  • Bit_score: 420
  • Evalue 1.20e-114
Tex-like protein {ECO:0000313|EMBL:EIJ33145.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 259.0
  • Bit_score: 420
  • Evalue 1.60e-114
RNA binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 260.0
  • Bit_score: 327
  • Evalue 2.90e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCAAAGTATCCTGACCCGAATCGCCACCGAATTAGCAGTGAATGAAAAACAAGTCGCGGCGACTGTCGAACTATTAGACGAAGGTGCTACCGTCCCGTTTATTGCGCGTTACCGCAAAGAAAAAACCGGCGGGCTGGATGACACCCAATTACGTTACCTTGAAACCCGCCTGAGCAGCTTACGCGAGTTGGAAAAACGCCGCGAAACCGTGCTGCACAGCATCCGCGAACAAGGTAAATTAACCCCGGAACTGGAACAGCAAATTCTCGCGCTGAATACGCGCACCGAACTCGAAGATATTTACCTGCCCTACAAGCCCAAACGCCGCACCAAAGCGCAGATTGCACGCGAAGCTGGAATCGAGCCACTGGCACAAACGTTACTGACTAACCCGCAACTCAACCCGGAAAGCGAAGCCGCTAACTACCTCAACCCTGCGATGGAATTTTCCGACAGCAAAGTGGTGTTGGACGGTGCGCGGCAAATTTTGATGGAAGATTTCGCTGAAAATGCTGAATTATCCGGGCGGTTGCGTGAATACTTGTGGGAACACGGGCATTTAGCCTCCAGTGTGATGGAAGGCAAAACCCAAGAAGGGCAAAAATTTGCCGACTATTTTGACTACAGCGAAGCACTCCACAAAATCCCTTCACACCGCGCACTGGCACTGTTTCGTGGGCGCAATGAAGGCATTCTCGACTTAAAACTCGATGTCAGTGTCGCCGATGGCATGAGCCACCCTTGCGAAGATGCAATTGCTACTGCTTTTAATATTCGTNNNNNNNNNNNNNNNNNNNNNNNNNTTACTCGCCGCACCTGCGGGCGCACGCACCACTTTAGGCTTAGACCCCGGTTTACGCACCGGTGTCAAAGTAGCCATCGTTGA
PROTEIN sequence
Length: 296
MQSILTRIATELAVNEKQVAATVELLDEGATVPFIARYRKEKTGGLDDTQLRYLETRLSSLRELEKRRETVLHSIREQGKLTPELEQQILALNTRTELEDIYLPYKPKRRTKAQIAREAGIEPLAQTLLTNPQLNPESEAANYLNPAMEFSDSKVVLDGARQILMEDFAENAELSGRLREYLWEHGHLASSVMEGKTQEGQKFADYFDYSEALHKIPSHRALALFRGRNEGILDLKLDVSVADGMSHPCEDAIATAFNIRXXXXXXXXXTRRTCGRTHHFRLRPRFTHRCQSSHR*