ggKbase home page

ar4r2_scaffold_7622_4

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3594..3923)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ46_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 109.0
  • Bit_score: 178
  • Evalue 2.90e-42
Transport permease protein {ECO:0000256|RuleBase:RU361157}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 109.0
  • Bit_score: 178
  • Evalue 4.00e-42
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 109.0
  • Bit_score: 169
  • Evalue 6.40e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
TTAACCTCTGCCCTATTTTCACTGGCAGGTTTAATCAATGCAGTTTACGCAAAAAGCTTTGATGACATTACCATTGTTCCCACCTTTGTGTTAACACCATTGACGTATTTGGGCGGGGTGTTTTATTCGATTAGTTTATTGCCACCTTTTTGGCAAAGTGCATCGTTAACCAATCCTATTTTGTACATGGTTAACGGGTTTCGCTATGGCATTTTAGGCACAGCGGATATAAGCATCTGGGTCAGTTACAGCGTAATCATCGGGTTTATCGTATTGCTAGGCGGCTTTGCCATGTATTTATTGCACCGTGGCATTGGTATTCGGAGTTAA
PROTEIN sequence
Length: 110
LTSALFSLAGLINAVYAKSFDDITIVPTFVLTPLTYLGGVFYSISLLPPFWQSASLTNPILYMVNGFRYGILGTADISIWVSYSVIIGFIVLLGGFAMYLLHRGIGIRS*