ggKbase home page

ar4r2_scaffold_10551_9

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(4944..5261)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 105.0
  • Bit_score: 171
  • Evalue 6.10e-40
DNA ligase, NAD-dependent (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 105.0
  • Bit_score: 116
  • Evalue 4.70e-24
DNA ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZ75_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 105.0
  • Bit_score: 171
  • Evalue 4.40e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
GCAGAAGCACATAACCGCGATACCATCCAGCACTTACGCGATTTGGGCGTGCATTGGTCAAACTACGAAGCCAAACCTGCTGAAGCCTTGCCATTAGCGGGCAAGACTTACGTGATTACCGGCACACTCAGTCGGGCGCGTGAGGACATCAAAGCCGATCTGGAAGCGTTAGGGGCGAAAGTGTCGGGCAGCGTTTCCAAGAAAACCACGGCCTTGATTGCGGGTGAGAATGCTGGTTCAAAGTTAACTAAAGCGCAAGAGTTGGGTGTGGAAATCTTGGGAGAAGACACTTTATCCGTTCTTTTGTGCCAATCGTAA
PROTEIN sequence
Length: 106
AEAHNRDTIQHLRDLGVHWSNYEAKPAEALPLAGKTYVITGTLSRAREDIKADLEALGAKVSGSVSKKTTALIAGENAGSKLTKAQELGVEILGEDTLSVLLCQS*