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ar4r2_scaffold_10557_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1723..2034)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ53_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 103.0
  • Bit_score: 196
  • Evalue 1.30e-47
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=870187 species="Bacteria; Proteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 103.0
  • Bit_score: 196
  • Evalue 1.70e-47
integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 97.0
  • Bit_score: 166
  • Evalue 5.10e-39

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGCAATAACTTTGACCAAAGCCGATATGGTCGAGCATTTATTTGAAGAACTGGGTTTAAACAAACGTGAAGCCAAAGATTTGGTGGAAATGTTTTTTGAAGAAGTGCGTGACGCGCTGGAAACAGGCAGGAATGTAAAGCTGTCTGGGTTTGGTAATTTCATGCTGCGCGACAAGACGCAGCGTCCGGGGCGTAACCCTAAAACGGGTGAAGAAATTCCGGTAACGGCACGTCGCGTGGTGACCTTCCGTCCGGGGCAAAAGCTCAAACAACGGGTAGAGGAATATGCAGGAAGCGGTAACGCCGAATAG
PROTEIN sequence
Length: 104
MAITLTKADMVEHLFEELGLNKREAKDLVEMFFEEVRDALETGRNVKLSGFGNFMLRDKTQRPGRNPKTGEEIPVTARRVVTFRPGQKLKQRVEEYAGSGNAE*