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ar4r2_scaffold_6852_8

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3572..3973)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=870187 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 133.0
  • Bit_score: 237
  • Evalue 1.20e-59
Transcription-repair-coupling factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 133.0
  • Bit_score: 237
  • Evalue 8.30e-60
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 133.0
  • Bit_score: 158
  • Evalue 1.40e-36

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
CTGATCCCCGATGATTATTTGCCGGATGTGCATAGCCGCTTGATCCTCTACAAACGCATTGCCAGCGCGGTGTCGCAGGCGGCGCTGGACGAGTTGCGGGTGGAAATGATCGACCGCTTCGGGCTGCTGCCGAAGCAAACCAAGACGCTGTTCAGCGTCACGCGGCTGAAACTGATTGCGCAGGGCTTGGGCATCCGCAAGCTGGACGTGAACGCCAAGGGCGGGCGCATGATCTTTGAGGATAAGCCGGCTATTGACCCGATGAAGGTGATTACCCTGATCCAGAAACGCCCGTGGGTGTTTAAGCTGGATGGGCAGGATAAGTTGCGTTTTGAGGTGGAATTGCCGACGGTGGAGGAGCGGGAGGAATGGGTGGTTGGGTTGATGGGGGAGATTGGGTAG
PROTEIN sequence
Length: 134
LIPDDYLPDVHSRLILYKRIASAVSQAALDELRVEMIDRFGLLPKQTKTLFSVTRLKLIAQGLGIRKLDVNAKGGRMIFEDKPAIDPMKVITLIQKRPWVFKLDGQDKLRFEVELPTVEEREEWVVGLMGEIG*