ggKbase home page

ar4r2_scaffold_6961_4

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(2738..3910)

Top 3 Functional Annotations

Value Algorithm Source
lytic murein transglycosylase (EC:2.4.1.129) similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 373.0
  • Bit_score: 362
  • Evalue 1.40e-97
Lytic murein transglycosylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZ42_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 391.0
  • Bit_score: 534
  • Evalue 9.50e-149
Lytic murein transglycosylase {ECO:0000313|EMBL:EIJ36635.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 391.0
  • Bit_score: 535
  • Evalue 6.00e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
GTGGTGCTGTTCGGCTATACCGCTGTTTCAGACCGCGCGTTTGATTCATGGAAAGTTGAGTTTAAAACCTTGGCAGTCGGGCAAGGCATCCGTGCGGCCGTGGTTGACATTGCTTTTCGCGGTTTATTACCTGACCGCAAAGTGCTGGAGCTAGACACTAAACAGCCAGAATTCACCAAGACCGTTTGGGAATATTTAGCCTCTGCAACTGCACCAACCCGCATTGCAACCGGGCAAGAACGCTTACGCACCTACGCTCCCCTCCTCAATCAATTACACGCACAATACGGTGTACAACCCGAATACCTGCTTGCCGTGTGGGGCTTGGAAAGTGATTTCGGGCGTTATACCGGTCGTCATAACACCATTCGCTCTTTAGCCACCCTAGCCTATGCAGGCACACCTGAACGCCGTACATTTTGGCAACAACAATTACTGTCCGCGCTACGTATCGTGCAAAACGGCGACATGCCACTGAGCAGTATGCGTGGTTCTTGGGCTGGTGCGTTGGGACACACTCAATTCATCCCCACCACTTTTGAAGCTTTTGCAGTCGATTTCGACGGCGACGGTAAGCGTGATTTGGTCAATAGCATTCCCGATGCGCTCGCTTCCACCGCCAATTACCTCGCGCAGTCTGGCTGGCAACGCGATAAACCGTGGGGAACCGAGGTACGTTTACCCAGCGATTTCGATTGGAGCAAATCAGATCCGAATTTTTGGCAAGCCAGCAGCATTTGGGCAAATGAAAACGCGGTCACACTTGCCGATGGCTCACCGTTAACCACCGATGACAATGCGTTTGTGTTTTTACCTGCTGGGCATCGTGGCCCCACCTTTCTGGCATTCCACAATTTCAGCGTGATTTTGAAATACAACAATGCACAAAATTACGCATTAGCTGTGGGACACTTAGGCGATTTAATCCAAGGAAAACCACCGCTGCACGGCAAGTGGCCTGCCCACGAACAACCGCTCAGCCACACCCAAAAGGCTGAATTACAAGAACTATTAAGCGCACTCGGTTACAGCACCGATGGTGTAGACGGAAAAATTGGCCCCAATACCCGCGCTGCATTGCGCCGTTGGCAATTGGATTCCGGGTTCCCGGCGGATGGGTATGCCACGTTGGAACAGCTCCATATGCTACAGGCACTTGTTTCATCCGAATAA
PROTEIN sequence
Length: 391
VVLFGYTAVSDRAFDSWKVEFKTLAVGQGIRAAVVDIAFRGLLPDRKVLELDTKQPEFTKTVWEYLASATAPTRIATGQERLRTYAPLLNQLHAQYGVQPEYLLAVWGLESDFGRYTGRHNTIRSLATLAYAGTPERRTFWQQQLLSALRIVQNGDMPLSSMRGSWAGALGHTQFIPTTFEAFAVDFDGDGKRDLVNSIPDALASTANYLAQSGWQRDKPWGTEVRLPSDFDWSKSDPNFWQASSIWANENAVTLADGSPLTTDDNAFVFLPAGHRGPTFLAFHNFSVILKYNNAQNYALAVGHLGDLIQGKPPLHGKWPAHEQPLSHTQKAELQELLSALGYSTDGVDGKIGPNTRAALRRWQLDSGFPADGYATLEQLHMLQALVSSE*