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ar4r2_scaffold_13382_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(376..1254)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN93_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 243.0
  • Bit_score: 413
  • Evalue 2.40e-112
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EIJ32836.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 243.0
  • Bit_score: 413
  • Evalue 3.40e-112
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 274.0
  • Bit_score: 252
  • Evalue 1.20e-64

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGATGACAAGAAACCCTGAATTTCCGAGTGAATTAGTCAACATGCACATCTCATTCCGCCAGATCCAGATCTTCCAGACCGTTGCCCAAACGGAAAATTTTACTCGCGCCGCTGAATTGTTACACATGACCCAGCCCGCTATCTCGATGCAGGTCAAGCAATTGGAAGAAAACGTGGGTTTGTCGTTATTTGAACGCCAAGGCAAGCGCATTGTGCTGACGGCGGCGGGGCGGGCAATGCACACCTACACCTGCGAGATTTCTGCTAAGTATCAGGGCATGGTGGAAACGCTGGAAGAATTGAAGGACGTGCATCAGGGCGTTATTAATGTATCGGCGGCGAATACCTCGATTTACTTTATTACGCGGATGTTGGCGGGGTTTTCGCAGCAGAATGAGGGGATTACGGTGTCGCTGAATATCACCAACCGCAAGACGCTGGTAGAACAGTTACAGAATTACGAGGCGGATTTGGTGGTGATGGGTGAGCCGCCGTCGAATCTGGATTTGCATTCGCAACGTTTGATGTGCAATCCGCTGGTGCTGATTGCGCCTGCGAATCACCCGCTGGCGGGGCAGAAAGACATTCCGGTGTCGGCAATTATTGGCGAAAAGTTTGTGGTGCGCGAACCGGGGTCGGGGACGCGAGCGGCAATTGAGCGGTTTTTTGCCGAACACGGGCATACGTTTTCCAGTACGCTGGAAATGGGCAGCAATGAGTCGATCAAGTATTCGGTGATTGCGGGGCTGGGGCTGGGGATTGTGTCCTTTTGGTATTGCTGGATGTGGAGGGTTTCCCCATCCAGCGTTATTGGCACATTATTACCCGTGAAGGTAAGTGGCTTTCACCCGCAGCGCAGGCGTTCAAGGAATACGTGA
PROTEIN sequence
Length: 293
MMTRNPEFPSELVNMHISFRQIQIFQTVAQTENFTRAAELLHMTQPAISMQVKQLEENVGLSLFERQGKRIVLTAAGRAMHTYTCEISAKYQGMVETLEELKDVHQGVINVSAANTSIYFITRMLAGFSQQNEGITVSLNITNRKTLVEQLQNYEADLVVMGEPPSNLDLHSQRLMCNPLVLIAPANHPLAGQKDIPVSAIIGEKFVVREPGSGTRAAIERFFAEHGHTFSSTLEMGSNESIKYSVIAGLGLGIVSFWYCWMWRVSPSSVIGTLLPVKVSGFHPQRRRSRNT*