ggKbase home page

ar4r2_scaffold_14059_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 1776..2402

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNH9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 198.0
  • Bit_score: 342
  • Evalue 3.70e-91
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIJ32922.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 198.0
  • Bit_score: 342
  • Evalue 5.20e-91
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 148
  • Evalue 1.70e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCCGTACTTAAAGAAGTGTCCCTCCCAGCCCGAACCGATTGACTGCCGTATTCTGACCGCAGCGTTAGATTTGTTTGTCGAAAATGGCTACCACAATGTTTCGATCCACGAAGTGCAAAAGCGTGCGCAAGTCAGCATTGGCTCGATTTACAATCACTTCGGCGGCAAAGAAGGTGTGGCGCAAGCACTCTACAAACACATTCTTAATGAAGTCGATGAGTTGGTGGATGCGGTCATGGCGGAATACCCAGCCCCTTGGCAGCAATGTGAAGCCATTATCCAGCAGTTATTTGGCTACACTGAAACCCACCGCAATATCATCGCCTTTGCGTTTCATGCCAAGCACACCGAATTCATTTCCGAAGAACCGTTGGCGTGTCGTTCTGCTCCGTTTAGCAAAATGCGTCAGATTGTGCGCCAAGGTATCGACAACGGTGATTTCGTCGCGCTTGATCCGTGGGTCATTACCTCCAGCATTTTTGGTGGGGCGATCCGTATGATCCAGTTGCGTGTAGATGGTGTGATCGAAAATCCTTTGCCGGAATACGCGCCACAATTGCTGCAAACCATTCGTGCAGGCGTACTCCAAAACGGCGGTTGTCAGCAGACTGTAACCGTCGGATAG
PROTEIN sequence
Length: 209
MPYLKKCPSQPEPIDCRILTAALDLFVENGYHNVSIHEVQKRAQVSIGSIYNHFGGKEGVAQALYKHILNEVDELVDAVMAEYPAPWQQCEAIIQQLFGYTETHRNIIAFAFHAKHTEFISEEPLACRSAPFSKMRQIVRQGIDNGDFVALDPWVITSSIFGGAIRMIQLRVDGVIENPLPEYAPQLLQTIRAGVLQNGGCQQTVTVG*