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ar4r2_scaffold_14897_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 2..646

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=870187 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 214.0
  • Bit_score: 410
  • Evalue 1.60e-111
Transcription termination factor Rho n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVZ7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 214.0
  • Bit_score: 410
  • Evalue 1.10e-111
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 214.0
  • Bit_score: 381
  • Evalue 1.20e-103

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTCTTGCTTATTGATGAGCGTCCTGAAGAAGTGACCGAAATGCAACGTATGGTGCATGGTGAGGTTGTTTCTTCCACCTTTGATGAGCCAGCCGCACGCCATGTGCAAGTCGCTGAAATGGTGATTGAAAAAGCCAAGCGTCTGGTTGAACACAAACGTGACGTGGTGATTTTGCTGGACTCCATTACCCGTTTAGCGCGTGCTTACAATACGGTTGTACCATCGTCGGGTAAAGTATTGACCGGTGGTGTTGACGCTAATGCTTTACACCGTCCAAAACGCTTCTTTGGTGCGGCGCGTAATATTGAAGAGGGTGGTAGTTTAACCATTATTGCCACGGCTTTGATTGATACCGGTTCCAAAATGGACGAGGTTATCTACGAAGAATTCAAAGGTACGGGTAATATGGAAATCCACTTGGATCGCCGTATTGCTGAAAAGCGCGTATTCCCAGCGATTAATATTAACCGCTCCGGTACACGTCGTGAAGAACTGTTAACCACGCAAGACGAGCTGCAAACGCTGTGGGTGTTGCGTAAGTTCTTGCATGGTATGGATGACTTGGAAGCAATGGAATTGCTGTTCGACAAGCTGTCGAAGACTAAGACCAACAGTGAATTCTTTGACGTAATGCGTCGGGGTTAA
PROTEIN sequence
Length: 215
VLLIDERPEEVTEMQRMVHGEVVSSTFDEPAARHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEIHLDRRIAEKRVFPAININRSGTRREELLTTQDELQTLWVLRKFLHGMDDLEAMELLFDKLSKTKTNSEFFDVMRRG*