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ar4r2_scaffold_15026_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(2806..3753)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BW83_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 315.0
  • Bit_score: 482
  • Evalue 3.50e-133
  • rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:EIJ35626.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 315.0
  • Bit_score: 482
  • Evalue 4.90e-133
sigma-54-dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 309.0
  • Bit_score: 351
  • Evalue 2.60e-94

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGCGTTTTGATGACATCCTGACTCGTTCACCCGTTTTGGAAGCCGTATTGCGTTCCGCACATTTGATTGCTCAAACCGATGCCAGCGTGTTAATCACGGGTGAATCCGGTACGGGTAAAGAATTGGTAGCACACGCCATGCACGCCGCCAGCCCGCGCCAGCAACAGCCTTTTATTGCAGTGAATTGCGCAGCATTACCTGAAACACTAGCAGAATCTCTCCTATTCGGACACCGCAAGGGCGCGTTCACGGGTGCTGACAATAATCATGCTGGTTTATTAACAGCGGCGGAAGGTGGCACATTATTTTTGGATGAAATCGGGGAATTGCCATTAAATCTGCAAGCGAAATTACTGCGCTTTCTGGAATCGGGCGAAATCTTACCACTGGGTGAAACACAAGCGAAACGCCTCAATGTACGCGTGTTTGCTGCTACTCACCGGGATTTATTCAAGCTGGCAGCAAGCGGGGAATTCCGGCGCGATTTGTTTTTCCGCCTGAACATTATTCCAGTAGAATTACCGCCACTGCGCGAACGCAAAGAAGACATTGAATTATTGCTCAATCATTTCCTCCAGCAATTTGCAACGCAACACCAATTGCCACGCGCCAGCTTTGATAAAGCCGCACGCCAGCAATTGTTGCGCCATACTTGGACCGGTAATGTTCGCGAATTACGCAATGTGTGCGAACGCTGTAGCATTTTGCTCGCAGGTCGCGAAATTGGTGTGCTGAATCTGCCCCACGAATTACGCACTCAAGACGCACCCGCACACAGCACACCTTTCAGCCTGCCTATGCACGGGGTTAATCTGGATGAACTTGAACGTGATTTACTCAATCAAGCCTTAGAACGCACGCAAAACAATAAAACACACGCTGCTAAACTGTTGGGCATTAGCCGTGACGCACTAAATTATCGACTGAAAAAACAGTTGCTTGCATAG
PROTEIN sequence
Length: 316
MRFDDILTRSPVLEAVLRSAHLIAQTDASVLITGESGTGKELVAHAMHAASPRQQQPFIAVNCAALPETLAESLLFGHRKGAFTGADNNHAGLLTAAEGGTLFLDEIGELPLNLQAKLLRFLESGEILPLGETQAKRLNVRVFAATHRDLFKLAASGEFRRDLFFRLNIIPVELPPLRERKEDIELLLNHFLQQFATQHQLPRASFDKAARQQLLRHTWTGNVRELRNVCERCSILLAGREIGVLNLPHELRTQDAPAHSTPFSLPMHGVNLDELERDLLNQALERTQNNKTHAAKLLGISRDALNYRLKKQLLA*