ggKbase home page

ar4r2_scaffold_16810_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(96..788)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1. similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 229.0
  • Bit_score: 436
  • Evalue 1.70e-119
Uroporphyrinogen decarboxylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYY1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 229.0
  • Bit_score: 436
  • Evalue 1.20e-119
uroporphyrinogen decarboxylase similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 229.0
  • Bit_score: 363
  • Evalue 3.70e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGAATGCGGTGCGTACCATTCGCCGTGAGCTGGATGGGCGAGTTCCATTGATTGGTTTCACCGGTAGCCCTTGGACACTCGCCACGTACATGGTCGAGGGTAGTTCCAGTAAGGAATTTGCCAAGGTCAAGGGCATGTTATATGACAATCCCAAAGCCCTGCATTTGTTACTGGATAAACTGGCAGACAGTATTATCCTCTACCTGAATGCACAAATTGCCGCTGGTGCGCAAGCTGCCATGATTTTTGATACTTGGGGTGGCTCGTTGACTCCGGCGACTTACCGCGAGTTTTCATTGCGTTATATGCAAAAAATCGTCGATGGCGTGACTCGTGAAAATGATGGTCGCAAAGTCCCTGTCATTTTATTCACCAAAGGCGGAGCGCAATGGCTCGAACCAATGGCGGATACGGGTTGTGATGGCTTAGGTCTGGACTGGACGATTGATATTGCTGCTGCGCGTGCGCGTGTGGGCGATAAAGTTGCCCTCCAAGGCAATATGGATCCTTGCGTATTGTATGCGTCACCAGAAGTCATTCGCCAGCAAGTCGCTGATATATTAGCGAGTTATGGTCAAGGCTCTGGGCATGTATTTAATCTGGGGCATGGCATTCACCAGCATATTAACCCTGAAAACGTGGCAGTATTGGTTGATGCTGTACATGAATTAGGGCGGCAATATCACGTCTGA
PROTEIN sequence
Length: 231
MNAVRTIRRELDGRVPLIGFTGSPWTLATYMVEGSSSKEFAKVKGMLYDNPKALHLLLDKLADSIILYLNAQIAAGAQAAMIFDTWGGSLTPATYREFSLRYMQKIVDGVTRENDGRKVPVILFTKGGAQWLEPMADTGCDGLGLDWTIDIAAARARVGDKVALQGNMDPCVLYASPEVIRQQVADILASYGQGSGHVFNLGHGIHQHINPENVAVLVDAVHELGRQYHV*