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ar4r2_scaffold_17545_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(149..1570)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, TetR family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3C002_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 473.0
  • Bit_score: 769
  • Evalue 2.10e-219
  • rbh
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:EIJ36945.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 473.0
  • Bit_score: 769
  • Evalue 3.00e-219
integrase similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 463.0
  • Bit_score: 463
  • Evalue 9.30e-128

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGATAAGAAGCATACACGAAGCCCCGCCGAACCAGCAACCACGTATTCCCATGAATTTTGGGAAAACTACACACTTTTTCTTGTTAAACATGGCGTTAGCCAGAAATATGTGACGTGGTATGTGTTGCGTACCAAGCAGTACATTGCTTATTTTCCAGACCAGCATATTCGTACCCACACAGCCCAACAAGTAGAGGAATATCTCAACAAAGTCGGGCATGAAGTCAACTTGAAACCGTGGCAATTTGGGCAGATCGTCGATGCTATACGGATTCTGTTTTGTCTGGCATTGAAAAAGGGTTGGGCGCATGACTTTGATTGGGAGTACTGGTCAGCGTCCGCGAAAAAGTTGGAAGCTGATCATGCTACCGTTGCGCGTGATTACACCGATGCGCTGGAAGCCCTTGAAGGTTTGGAAATGCTGGAGGGCGAAGAACGTTGTTCTAACGAACTTTACCAGCGTTACCAACCCGCCATCGCGGAAGTGGTCAAAGTGGTACGCCTCAAAAATTATGCGATGCGTACCGAGAAAACCTATCGCGGCTGGATCTCCCGCTTTTTCTACTTCCACAAGCCAAACGACGTACATGATTTAGCAGGTAAAGAGGTCAAGCAATACCTCGAATACCTTGTCCTCAAGCGCAACGTATCGGTTTCCACCCAAAAACAAGCGTTAAATGCCTTGGCATTCCTGTTTAACCAAGTGTGGAAAAAGCCGCTGGATGATCTGGGCGACTTTATCGGTTCAAAACGCCCACGTAAATTGCCGGTAGTGCTGTCCCGCGATGAAGTGCGCCGCATCTTCCAACATCTGCAAGGTACACATCACTTAATGACAGGGCTGCTCTACGGTGGCGGTTTGCGCCTTATGGAGTGCGTGACCCTGCGGATTCTGGATGTGGATTTCGATTACAACCAACTGCTGATCCGCAATGCCAAAGGTTTCAAAGACCGGATTGTGCCATTGCCTGAACGTTTCAAAGAAGCCCTCAAACAACAAATTGCTTTCGTTGAGCGTCAACACCAAATGGATTTAAAAAACGGCTTTGGTGAGGTGTATTTGCCGGATGCCTTGGGGCGCAAGTACCAAAATGCGGGGAAAGAATTGCGCTGGCAATACGTGTTTCCATCCAGTGGTGTTGCTGCTGACCCGCGTTCGGGGGTGGTGCGCCGCCATCATGTGCATGAAACTAGTTTGCAGAAAATCATTCGTCGAGCCGTGAAACAAGCGGGCATCACCAAACACGCTACCAGCCATTCGTTTCGCCATTCATTCGCTACGCATTTGCTGGAGTCGGGTTACGACATTCGCACCGTGCAGGAATTGTTGGGGCATTCGGATGTGTCTACGACCATGATTTATACCCATGTGCTAAACACGCCCGGTATCAGCGTTCGAAGTCCGGCGGACATGATTTAA
PROTEIN sequence
Length: 474
MDKKHTRSPAEPATTYSHEFWENYTLFLVKHGVSQKYVTWYVLRTKQYIAYFPDQHIRTHTAQQVEEYLNKVGHEVNLKPWQFGQIVDAIRILFCLALKKGWAHDFDWEYWSASAKKLEADHATVARDYTDALEALEGLEMLEGEERCSNELYQRYQPAIAEVVKVVRLKNYAMRTEKTYRGWISRFFYFHKPNDVHDLAGKEVKQYLEYLVLKRNVSVSTQKQALNALAFLFNQVWKKPLDDLGDFIGSKRPRKLPVVLSRDEVRRIFQHLQGTHHLMTGLLYGGGLRLMECVTLRILDVDFDYNQLLIRNAKGFKDRIVPLPERFKEALKQQIAFVERQHQMDLKNGFGEVYLPDALGRKYQNAGKELRWQYVFPSSGVAADPRSGVVRRHHVHETSLQKIIRRAVKQAGITKHATSHSFRHSFATHLLESGYDIRTVQELLGHSDVSTTMIYTHVLNTPGISVRSPADMI*