ggKbase home page

ar4r2_scaffold_17673_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(845..1276)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotricha similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 143.0
  • Bit_score: 191
  • Evalue 6.00e-46
DNA polymerase III, alpha subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNU4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 143.0
  • Bit_score: 190
  • Evalue 9.50e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 143.0
  • Bit_score: 91
  • Evalue 2.20e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
GTGCAGTTGGACGATAAAACCGCGTATTACGAAGCCCTGATTTTCACCGATGCGTTTGCGCAATTTGGGCATTTGCTCGAAAAAGAAACGGCGGTGGTGTTGGAAGGCACGCTAGATACCGATCAGCGCACCGGCAAAACCCGCTTGCGTGTGGAAAAAATTCACAATATGTTGTCGATTCGTGAAAACTTCCTACGCAAACTGGTATTACGGGTGGATGCGGCGGAAGTGCAGGCTGGTGCTTGGGCGGAATTACGCAAGTTTTTACAGCCCGACGCGCCGATGAAATGCGCGGTAACGGTTGAATACCGCACCCCGCAAGCGCAAGGCGAATTACGCCTCGGCGGGCAATGGGGCGTGGCGTTGGACGATGCTAATTTGCGCGATTTGCGGGTGGCATTAGGGCGTGAGAATGTCAGTTTGGTGTTTTGA
PROTEIN sequence
Length: 144
VQLDDKTAYYEALIFTDAFAQFGHLLEKETAVVLEGTLDTDQRTGKTRLRVEKIHNMLSIRENFLRKLVLRVDAAEVQAGAWAELRKFLQPDAPMKCAVTVEYRTPQAQGELRLGGQWGVALDDANLRDLRVALGRENVSLVF*