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ar4r2_scaffold_18034_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(111..653)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 173.0
  • Bit_score: 255
  • Evalue 7.20e-65
Peptide deformylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUL7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 173.0
  • Bit_score: 255
  • Evalue 5.20e-65
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 167.0
  • Bit_score: 224
  • Evalue 2.10e-56

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGCAGTATTAAACATTTTACATCACCCAGACGCGCGTTTACGTCGCAAAGCCGCTCCCGTAGCGGCGGTGGACGCGGCATTACAACAATTCGTGGATGACATGTTTGAAACCATGTACGCCAACCAAGGTATTGGTTTGGCAGCAACGCAGGTCAATAGCTTGCGGCGCGTGGTTACTATCGACATCTCTGAGCATAAAGATGAGCGTTTATGCTTGATCAACCCTGAAATTACCCACAAAGAAGGCGAGATTGAGCATGAGGAAGGCTGTTTATCAGTGCCGGATTACTACGACACAGTAACCCGTGCCGAGCGTATTCGGGTACAAGCCTTGAATCGTGCCGGTGAAACGTTGGAGTTGGAAGCGGATGGTTTGCTGGCGATCTGCATTCAGCATGAAATTGATCATCTGGATGGCAAGTTGTTTGTGGATTACTTGTCCACCTTAAAGCAACAGCGGGTACGCAAAAAAATGGAAAAGTGGGAAAAAGAAAATGCAGGCAAGCCCGCCAAAGCAGAAGCACAGGCGGCGGCTGAATGA
PROTEIN sequence
Length: 181
MAVLNILHHPDARLRRKAAPVAAVDAALQQFVDDMFETMYANQGIGLAATQVNSLRRVVTIDISEHKDERLCLINPEITHKEGEIEHEEGCLSVPDYYDTVTRAERIRVQALNRAGETLELEADGLLAICIQHEIDHLDGKLFVDYLSTLKQQRVRKKMEKWEKENAGKPAKAEAQAAAE*