ggKbase home page

ar4r2_scaffold_17271_6

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(2791..4038)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYM8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 407.0
  • Bit_score: 574
  • Evalue 6.80e-161
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Th similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 407.0
  • Bit_score: 574
  • Evalue 9.50e-161
polymerase similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 408.0
  • Bit_score: 391
  • Evalue 3.00e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
TTGAGTCAGACCGCATGGGCAGCCGGTTTTGTGGTGCGTGATATTGAGGTTAATGGTTTGGAGCGTGTACCAGCGGGTACGGTGCTCAACTATTTACCGGCACGTATTGGTCAGGCTTTTGACGATCAGCAAACCGGCAATGCTATTAAAGCGTTGTTTGGCACAGGTTTGTTCGACGATGTGAAAGTTGGACGGCGTGGCGATGTGTTAGTGGTTAACGTGGTGGAACGTCCTGCCATCGGTGAGATTAACCTCAAAGGCAACCGCAAAATTCCTTCCGCGAAACTCATGGAAGTGCTGAAATCCCGCAATGTCGGCAAAGGCGATACCCTTGATAAAGCTGCATTGTTGAGTATCCAACAAGAATTAGAAGAGCAGTACAAGGCGATGGGTTACTACGGGGTAAGCGTAGAAACCACGATTGAACCGTTATTGCGTAATCGCGTTGCGGTCAATATTAACGTGAAGGAAGGTGCGACAACCCGCATCAAAAACGTCAAAATCGTCGGCAATCAAGCGTTCCCTGAAGCGGTTTTATTAAAGCAGTTGGAATCCGGCCCACGCGGGGCATTTACGATTCCTTTCCTGAGTGACCGTGATAAATATTCCAAAGATAAACTCATTGGTGATTTGGAAAACCTCACTTCTTTCTACCGTGACCGTGGTTATCTGAATTTTGAAATTACTTCTACGGAAGTCACTATGTCACCGGATAAGAAGGATATTTTCCTGACGGTGGGTGTACAAGAAGGTGATCAATACCGTATTCGTGATGTTACGGTAGCCGGTGATTTAGGGCTGTCAAAAGAGCAGTTGGGTGAGTTAATTAAAATCCGCCAAGGCCAAGTGTTTTCCCAAAAAGCGTTGGAAGAAACCCGTAAAAACCTCGAAGGTAAATTGGGTGAGCAAGGTTTTGCAGCGGCAAAAATCAATGCCGTGCCTGACTTCGATCAGACCAATAAACAAGTTGGTATTACCTTGGCTGTCGAAACCGGTCGTCGTATTTATGTACGCCGGATCGACATTCGTGGGGCTAACCGCACCAAAGATGAAGTGTTCCGCCGCGAATTGCGTCAGTTAGAAAGCTCGCAGTATTCCAAAGAGCAAATTGAGCGTTCTAAAGTGCGTTTAGAGCGTTTGCCTTATGTGGAAGAAGCAAGCATTGAAGTCGAACCTGTCGCAGGCACGGAAGACCAAGTGGACTTGATTGTGAAAGTCACCAAGGGGTGTTGTTTAACGTTAACCTGA
PROTEIN sequence
Length: 416
LSQTAWAAGFVVRDIEVNGLERVPAGTVLNYLPARIGQAFDDQQTGNAIKALFGTGLFDDVKVGRRGDVLVVNVVERPAIGEINLKGNRKIPSAKLMEVLKSRNVGKGDTLDKAALLSIQQELEEQYKAMGYYGVSVETTIEPLLRNRVAVNINVKEGATTRIKNVKIVGNQAFPEAVLLKQLESGPRGAFTIPFLSDRDKYSKDKLIGDLENLTSFYRDRGYLNFEITSTEVTMSPDKKDIFLTVGVQEGDQYRIRDVTVAGDLGLSKEQLGELIKIRQGQVFSQKALEETRKNLEGKLGEQGFAAAKINAVPDFDQTNKQVGITLAVETGRRIYVRRIDIRGANRTKDEVFRRELRQLESSQYSKEQIERSKVRLERLPYVEEASIEVEPVAGTEDQVDLIVKVTKGCCLTLT*