ggKbase home page

ar4r2_scaffold_18532_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1..1620)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=870187 species="Bacteria; Proteobact similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 540.0
  • Bit_score: 946
  • Evalue 2.00e-272
DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 542.0
  • Bit_score: 784
  • Evalue 2.10e-224
DNA topoisomerase 1 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTX5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 540.0
  • Bit_score: 945
  • Evalue 2.50e-272

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
TTGGGGCCGGGCTTTGAAGTCCTTGCCTCTTATGGTCATGTGCGTGACCTAATACCGAAGGAAGGCGCGGTAGACCCTGAGAATGGGTATGCTATGCGCTATGAAATTATCGACCGCAACCAGAAGCATGTCGATGCAATTGCGCGGGCATTAAAAAAAGCTGATACCTTATATTTGGCGACTGACCCGGACAGGGAAGGTGAAGCCATTTCTTGGCATTTGCACGAATTGTTGCAAGAACGCGGTGCGTTAAAAAATAAAACGGTACATCGCGTAGTTTTCCACGAAATTACCAAACGCGCGGTTCAAGAAGCTATAGGCAATCCGCGTGAACTGGCGTATGACTTGGTGGATGCGCAGCAAGCGCGGCGCGCGCTGGATTACTTGGTGGGCTTTAATTTGTCGCCGTTGCTATGGCGTAAGATTAAACAAGGCTTGTCAGCAGGACGGGTGCAAAGCCCGGCATTGCGCTTGATTGTGGAGCGTGAGGAAGAAATTGAACGCTTCGTCACCCAAGAATACTGGACGATGACAGCGCACAATGAAAAAGACGCGCAGGCGTTTAGCGCACGTTTACACACATTGGATGCCAACAAGCTTGATCAGTTTGACATTAATAATGAAGCACAAGCGACAGTGTTGCGCGAACGTTTATTGCAAGCCGCGCAAGGCAGTTTGTTAGTCACTAAGGTCGAGAAAAAACAGCGTAAGCGTTACCCTTCCCCGCCGTTTACGACTTCCACTTTGCAGCAGGAAGCAGTGCGTAAATTGCGCTTTTCAACCCAACGCGCGATGCGGATTGCCCAGCAATTGTACGAAGGGATTGATTTGGGCAGTGGCGGTACAGTGGGTTTGATTACCTATATGCGTACTGACTCGGTATCGTTGGCAAACGAAGCCGTGGCGGAATTGCGCGAGTTGATTGGGCAACGTTACGGCAGTAGTAAATTGCCGGAAACCCCGAACTTTTACAAAACCAAGTCCAAAAACGCGCAGGAAGCCCACGAAGCGGTGCGCCCGACTTCCGCCTTGCGTACCCCGGAAAGCGTGAAGGCGTTTTTGAGCGAGGAACAGTTTAAGCTGTACGATTTGATCTGGAAGCGCACCGTGGCGTGCCAGATGATTTTCGCGACGTTCGATACGGTAGCGGCGGATTTGACCGCGACTGCCGGGAGCTTTTTCCGAGCCACCGGTTCGACGGTGCGTGACCCCGGTTTTTTGAGCGTTTACGAAGAAGGTTTGGACGACCGCGAAAACGAGAAAGACAATGCGTTGCCGCCGTTGGTTGAAGGCGAACGGATTACTTTGCTCGATATTAAAGCGGATCAGCATTTTACCGAACCGCCGCCACGTTATTCGGAAGCATCGTTGGTAAAAGCGTTGGAAGAGTTTGGTATTGGCCGCCCTTCTACCTATTCCAGCATTATTTCCACATTACTGTCGCGTGAATACGTGGAACTGGAAATGCGGCGTTTTACCCCAACCGATATTGGGCGCATTGTTAACCGTTTCCTGACGGAACATTTCCCGCAATACGTGGATTATGCGTTTACCGCGAATCTCGAAGATCAATTGGATGAGATTTCTCGCGGCGAAAAGACTTGGGTTCCGGTGATGGAT
PROTEIN sequence
Length: 540
LGPGFEVLASYGHVRDLIPKEGAVDPENGYAMRYEIIDRNQKHVDAIARALKKADTLYLATDPDREGEAISWHLHELLQERGALKNKTVHRVVFHEITKRAVQEAIGNPRELAYDLVDAQQARRALDYLVGFNLSPLLWRKIKQGLSAGRVQSPALRLIVEREEEIERFVTQEYWTMTAHNEKDAQAFSARLHTLDANKLDQFDINNEAQATVLRERLLQAAQGSLLVTKVEKKQRKRYPSPPFTTSTLQQEAVRKLRFSTQRAMRIAQQLYEGIDLGSGGTVGLITYMRTDSVSLANEAVAELRELIGQRYGSSKLPETPNFYKTKSKNAQEAHEAVRPTSALRTPESVKAFLSEEQFKLYDLIWKRTVACQMIFATFDTVAADLTATAGSFFRATGSTVRDPGFLSVYEEGLDDRENEKDNALPPLVEGERITLLDIKADQHFTEPPPRYSEASLVKALEEFGIGRPSTYSSIISTLLSREYVELEMRRFTPTDIGRIVNRFLTEHFPQYVDYAFTANLEDQLDEISRGEKTWVPVMD