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ar4r2_scaffold_19257_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1206..1481)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 89.0
  • Bit_score: 149
  • Evalue 2.20e-33
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000375C644 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 91.0
  • Bit_score: 151
  • Evalue 5.30e-34
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 89.0
  • Bit_score: 121
  • Evalue 9.70e-26

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGGGCGAGGATTTACACCGCGAACCGTGGTTGAAAAAACACCGTTATGACAAGATTTTACTTGATCCACCGCGTGCGGGCGCGAAAGAAATCATTGAGCATATCGGCAAGCTCAAAGCGGGACGCATTGTGTATATTTCCTGCGATCCAGCAACGTTAGCGCGTGACGCGGGTGAATTGGTGAATACGCATGGCTATCGCTTAGCGAGTGCAGGGGTGATGGATATGTTTCCGCATACATCGCATGTTGAATGCATCGCGGTGTTTGAGAAATAA
PROTEIN sequence
Length: 92
MGEDLHREPWLKKHRYDKILLDPPRAGAKEIIEHIGKLKAGRIVYISCDPATLARDAGELVNTHGYRLASAGVMDMFPHTSHVECIAVFEK*