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ar4r2_scaffold_20846_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 1065..1487

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion apparatus protein, HrpE/YscL family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWL1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 139.0
  • Bit_score: 180
  • Evalue 1.30e-42
Type III secretion apparatus protein, HrpE/YscL family {ECO:0000313|EMBL:EIJ35754.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 139.0
  • Bit_score: 180
  • Evalue 1.80e-42
bscL; type III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 136.0
  • Bit_score: 77
  • Evalue 3.30e-12

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGGAAAAATTCTTTTCAATTAAACCCCTTGGGGCGCAGTTTCAGGCGGATCAGCGGGTATTAAAAGCGGCGGATTATCAGCAAATCTTAACCTATGAACAGCATTTGCAGCAGTTGGAGCAGCGTTACCGCCAGCGTGAAAAAGTTGCGGCGGTAGCACTGGCAAAATCCATTCAGCGCGGTTTGGAAGAAGGACAAGAACGTGCCAACCGCCAGGCAGCAGAACAAATGGTGTTATTTGCGGGACGGGTGAATGACACCTTGACGCGGATTGAGGATGAGTTGGTCGAAGTGGTGACGGCGGCGGTGCGCAAAGTTATTCTCGGTTTCGACCAAGAAGAGAAGGTGCGCAATGCCGTGCAGGCGGGGTTGGAGTTGGTACGTGGTAGTCACAAATTATTGGTGCGGGTACACCCTCAACAG
PROTEIN sequence
Length: 141
MEKFFSIKPLGAQFQADQRVLKAADYQQILTYEQHLQQLEQRYRQREKVAAVALAKSIQRGLEEGQERANRQAAEQMVLFAGRVNDTLTRIEDELVEVVTAAVRKVILGFDQEEKVRNAVQAGLELVRGSHKLLVRVHPQQ