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ar4r2_scaffold_25160_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1..1266)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRI5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 447.0
  • Bit_score: 441
  • Evalue 1.20e-120
Type IV pilus secretin PilQ {ECO:0000313|EMBL:EIJ33978.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="T similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 447.0
  • Bit_score: 441
  • Evalue 1.70e-120
type IV pilus secretin PilQ/competence protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 355.0
  • Bit_score: 190
  • Evalue 1.00e-45

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
TCTGCCACTGCTGTTGATGTGGCGTTGGCGGCTGGACACCTGTTACAAGCAGTGACAGCACAATCGGTGGCGGCGAATAAAACCGAAGTGCGCTTGGAGTTTGACGCACCGATTACCCCACCCAAGGGGACGATTTTAGAAAATCCGGCACGCTTGGTGTTTGATTTCCCTGCTACCGAGGTTAGCCCCTCCAGCCGTCAGAAAACGGTGAATATGGGGCAGATTCAAGCCGTGGAAGCCGCAGGCAATAAAGGCAAGACGCGCGTTGTGGTGCGGATGCAGCAACTGGTGAATTACACGGTGGAAGTGCAGGGTAATGCCATTGTGATGGTGTTTGATGGCGATTGCGTCCCGAATTGTACCCCGCAAGTTGCACCAAGTGCGCCCACTCGTTCTGGGGCAAAAACCAGTGGCGATGGCAAATTCGCAACTTCCGGGAAAGCGACTGCGAGTGTAGTGCCAGAACTGCCGCCAGCGGTGGTTTTACCTGAGCCGCAAAAAGCGTCTGCTGATCCTGATTATAAATGGTATGTGCCGCCCGCAGATAATGCCGCGAAACCCGCACCGGTAGTGGTTCCGGTCGCTGAACGGGTTGTGCCTAAAACAGTTGCCGTTCCGCCTGTTGCCGTGGTTGCACCACCGCCACCGATGCCTGCTCCGGCGGCGATTAATCCGGCTGCGTTACGTGGGGTTGATTTCCGGCGTGAGCCAGAGGGTGGTGCGCGTATTGTGCTCGAATTACCATCGGCTGATACCAAAGTAAGCGATGATAAGCGTGGTAATGTCGTAACCGTCTCGATGATGGATGTGGACGTTCCTAAGCATTTGCAACAACGCATGGATGTGCTGGATTTTGGCACACCAGTAACGGAAGTGGACGTGGCGCAACGTGATATGGGGGCGCGTGTAATGATTTCCGCGCGTGAGGGATTTACCCATCGCACCCAGCGCAAAGGCAATGAATACACCGTGTTCATTGATAAAGCCAAAGTTGTAACCCCGGCTGAGAAATTGGCTTTGGGTGAAAAGAAAAAGAAAAACTTTACGGGTGAAAAGCTTTCCCTCAACTTCCAGGACATTGAAGTGCGGGCGGTATTGCAATTATTAGCCGATTTCACCAATAAAAACATTGTGGTAAGCGATACCGTGCAGGGCAATATCACAGTACGTTTGAAAGATGTACCGTGGGATCAGGCATTGGATATTGTGCTGGAATCCAAAAATTTAGGAATGCGCGAAAACGGCAATGTCATTTGGGTTGCACCT
PROTEIN sequence
Length: 422
SATAVDVALAAGHLLQAVTAQSVAANKTEVRLEFDAPITPPKGTILENPARLVFDFPATEVSPSSRQKTVNMGQIQAVEAAGNKGKTRVVVRMQQLVNYTVEVQGNAIVMVFDGDCVPNCTPQVAPSAPTRSGAKTSGDGKFATSGKATASVVPELPPAVVLPEPQKASADPDYKWYVPPADNAAKPAPVVVPVAERVVPKTVAVPPVAVVAPPPPMPAPAAINPAALRGVDFRREPEGGARIVLELPSADTKVSDDKRGNVVTVSMMDVDVPKHLQQRMDVLDFGTPVTEVDVAQRDMGARVMISAREGFTHRTQRKGNEYTVFIDKAKVVTPAEKLALGEKKKKNFTGEKLSLNFQDIEVRAVLQLLADFTNKNIVVSDTVQGNITVRLKDVPWDQALDIVLESKNLGMRENGNVIWVAP