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ar4r2_scaffold_21997_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(205..687)

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 154.0
  • Bit_score: 227
  • Evalue 2.90e-57
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN52_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 159.0
  • Bit_score: 290
  • Evalue 9.90e-76
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 159.0
  • Bit_score: 290
  • Evalue 1.40e-75

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGATGCGTATCGGTCACGGTTACGATGTTCATGCGTTTACGGCGGGTGATCATTTGGTGCTGGGTGGCGTAAAAATTGCGCACACGCACGCTTTTAAGGCGCATTCGGACGGTGATGTCTTGCTGCACGCGATTTGTGACGCACTGTTAGGGGCGTTGGCGTTGGGTGATATTGGGCAACATTTCCCCGATACCGCTGCCGACTATGCCAATATCGACAGCCGTATTTTATTGCGCCATGTGTACGGTTTAGTAAAAGCACGCGGCTATACCATCGGCAATCTCGATAGCACGATTGTGGCGCAAGCTCCGAAAATGGCTCCGCACATTGTGGCGATGCGCGAATCCATTGCAGCAGATTTAGAATGCGCTATTGATCAAATCAGCGTCAAAGCCACCACTACGGAAAAACTCGGTTTCACAGGGCGCAAAGAAGGCATTGCCGCTCATGCAATTGTTTTATTAGGAGTATCGCATGTTTGA
PROTEIN sequence
Length: 161
MMRIGHGYDVHAFTAGDHLVLGGVKIAHTHAFKAHSDGDVLLHAICDALLGALALGDIGQHFPDTAADYANIDSRILLRHVYGLVKARGYTIGNLDSTIVAQAPKMAPHIVAMRESIAADLECAIDQISVKATTTEKLGFTGRKEGIAAHAIVLLGVSHV*