ggKbase home page

ar4r2_scaffold_22206_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(107..556)

Top 3 Functional Annotations

Value Algorithm Source
CBS domain containing membrane protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPJ1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 149.0
  • Bit_score: 259
  • Evalue 2.30e-66
CBS domain containing membrane protein {ECO:0000313|EMBL:EIJ33284.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 149.0
  • Bit_score: 259
  • Evalue 3.20e-66
signal-transduction protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 147.0
  • Bit_score: 146
  • Evalue 6.00e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAAAGTTAAAGACATTATGAATACCAACGTAAAAACCGCTCAGGCAGATACACCGGTACGCAGCATTGTTGAAGTAATGTGTTTCAATAAAATCAGTGGCTTGCCAGTTGTTGATGCTGACAATAACATTGTTGGTGTAGTTTCTGAAAAAGATGTGTTGCGGAAAATGTTCCCCGATATTTCTGATGTTGCTAAAGAAGAGGGCGTGCCTGATTTTGAGCGCATGGAAAAAGACTATACAGACGCACTGTCTTTGAAGACCGGCGATATTATGAGTCGTTTGGTTGCTTCCGCAACGCCAGAAATGCCAGTGATGAAAGCTGTTTCCATGATGTGTGTGCAGAAAATTCGCCGTATTCCGGTATTGGATGGCAAAAAGTTAGTGGGCATTATTAGCCTTGGTGATGTGCATAAAGCAATCTTTGCAAATTCATTAAAAGCCTCTTGA
PROTEIN sequence
Length: 150
MKVKDIMNTNVKTAQADTPVRSIVEVMCFNKISGLPVVDADNNIVGVVSEKDVLRKMFPDISDVAKEEGVPDFERMEKDYTDALSLKTGDIMSRLVASATPEMPVMKAVSMMCVQKIRRIPVLDGKKLVGIISLGDVHKAIFANSLKAS*