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ar4r2_scaffold_28904_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(63..1121)

Top 3 Functional Annotations

Value Algorithm Source
Porin Gram-negative type n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXI8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 365.0
  • Bit_score: 312
  • Evalue 7.00e-82
Porin Gram-negative type {ECO:0000313|EMBL:EIJ36081.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thio similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 365.0
  • Bit_score: 312
  • Evalue 9.80e-82
porin Gram-negative type similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 382.0
  • Bit_score: 166
  • Evalue 1.70e-38

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
CGACTCATGAAAAAATTACTCGCAATCGCAGTTGCTGCTGCACTCGTAGCCCCTGCTGCTGCTATGGCCGATACTACACTGTACGGCAAACTGCACGTATCCGCTGGTTCTGTTAAAGATGGTGAGGCAAAGAAGCGTGGCGTGGTTGAAAGTCACAGCTCACGTATTGGTGTTAAAGGTGCGACTGCACTGGATAACGGCTTAGAAGCTACTTACGGTATCGAACTGGGTGTCCAGCTTGATGGTGATGCTGAAAATATTAGTAATGGTACTGCAAATGGTTTGACTACTCGTAATACATTTGTTGGCTTGAAAGGTGGTTTTGGTGAGGTTCGTGTTGGTAAACATGACACCCCTGCTAAGTTAGCTACCGCTGGTATGGATGTTTTCGCTGATACTTATGCTGATATGAACCGTGTCATTGAAGCCGATGCAATCCGTGCTGAAAACGTAGTAGCATACATCAATAAGTTTGGTCCGGTCGGTTTTGCCTATGCTCATTCGTCAGATGTTGGTGGTCAAGATCGTAACTACAATCAGGATTACTCTACTGACCGTCGTTTTAGTGCGCCGTTAGTAACTACCGCAGACGATGGTACGATTGTTGCCGACAGCCTGATGGTTAATTACTCAAATGGTCCATTTGTAGCGGCGTTGGGTCATACTTCTGCTAAGGCTACACATCCGACTGCCGTTGTTGACTCCGAAAAAGCTAAAATGACTAACATCGGTCTGGGCTGGAAATCAGAAGCTGGTCATAAAGTTAATTTCATCCATGAAACTGATAAAGTGACTGGTACAGGCTTTAGTGATAAAGCTAAAAGCAATCTGATTAATGGTGTCTACAAAGTCGGCAATGTTGATTTGAAAGCTCAGTATGGTAAAACCAAGGTTAGTGATAGTGATTATAGCGAAACATTAACCTCTGTTGGTGTTGATTATAACTTGGGTAAGAAAACAGCCGTCTACGGCTTGGTTTCTGATAACAAAGAAAAGTCAGGTGGTGTTAAAACTAACATCAACAAAGCTGCTGTTGTTGGTTTAGTTACTGAATTCTAA
PROTEIN sequence
Length: 353
RLMKKLLAIAVAAALVAPAAAMADTTLYGKLHVSAGSVKDGEAKKRGVVESHSSRIGVKGATALDNGLEATYGIELGVQLDGDAENISNGTANGLTTRNTFVGLKGGFGEVRVGKHDTPAKLATAGMDVFADTYADMNRVIEADAIRAENVVAYINKFGPVGFAYAHSSDVGGQDRNYNQDYSTDRRFSAPLVTTADDGTIVADSLMVNYSNGPFVAALGHTSAKATHPTAVVDSEKAKMTNIGLGWKSEAGHKVNFIHETDKVTGTGFSDKAKSNLINGVYKVGNVDLKAQYGKTKVSDSDYSETLTSVGVDYNLGKKTAVYGLVSDNKEKSGGVKTNINKAAVVGLVTEF*