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ar4r2_scaffold_28056_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(126..1217)

Top 3 Functional Annotations

Value Algorithm Source
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 336.0
  • Bit_score: 614
  • Evalue 7.30e-173
Succinyl-diaminopimelate desuccinylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN70_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 336.0
  • Bit_score: 614
  • Evalue 5.20e-173
succinyl-diaminopimelate desuccinylase similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 336.0
  • Bit_score: 498
  • Evalue 1.50e-138

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
TTGCATGACTCCAACTCTCGATCTCGCTATCGACCTCATTTCACGCCCTTCCGTCACGCCGCTGGTGCCGAATACCTGCGCTTTGGTGACGTGGATAATATTTGGTTACGCCGTGGCACAACCTCCCCGGTGTTTTGCTTTGCGGGGCATACCGATGTTGTTCCTACCGGGCCACTGGATGCGTGGGATAGCCACCCATTCCAGCCCGAAATCCGTGACGGAATGCTCTACGGGCGCGGCGCAGCGGACATGAAAGGCAGCATTGCCGCCTTCACGATTGCCTGCGAAACCTTCGTGCGTGAAAACCCGGATCACCAAGGCTCGATTGCGTTCCTGATTACCAGCGACGAAGAAGGTCCATCCATCAATGGCACGGTCAAAGTCGTGGAAGTGCTAGAACAGCGCAACGAGAAAATTGACTGGTGCTTAGTCGGCGAACCATCGAGTACTTGCTGCGTGGGCGATGTAGTGAAAAACGGGCGGCGCGGTTCACTCAATGGCGTACTCACCGTGATCGGGCAGCAAGGGCATGTGGCGTATCCGCATTTGGCAGACAACCCCATCCACCGCGCCGCGCCTGCGTTGGCGGAACTGGTGAGCATTGAATGGGATAAGGGTAACGAATTTTTCCCGCCAACCAGCTTCCAGATTTCCAATATCAAGGGCGGAACAGGCGCGAATAACGTGATTCCGGGCACGCTACACGTGGAATTCAACTTCCGCTTTTCGACGCAACAGACTGAAATGGGTTTGCGCGAGCAAGTGGAAGCGATATTTAACCGCCACGGGTTTGGCTATGAATTGAAGTGGACGCTTTCGGGGAATCCGTTTTTGACACCGCGAGGGGATTTAGTCGATGCGAGTGTCGCAGCGATTCAAGCGGTAAATGGGCAAGCGACGGAATTATCGACTTCTGGCGGCACATCTGACGGACGCTTCATTGCACCCACAGGTGCGCAGGTGATGGAACTGGGGCCAGTCAACAAGACCATTCACAAGGTCAACGAATGTGTCGCAGTGGATGACTTAAACGCACTCACCATCATTTACCAAAAAGTCTTGGAGCGGTTGCTGGGGCAAGTGTCGGGCTAA
PROTEIN sequence
Length: 364
LHDSNSRSRYRPHFTPFRHAAGAEYLRFGDVDNIWLRRGTTSPVFCFAGHTDVVPTGPLDAWDSHPFQPEIRDGMLYGRGAADMKGSIAAFTIACETFVRENPDHQGSIAFLITSDEEGPSINGTVKVVEVLEQRNEKIDWCLVGEPSSTCCVGDVVKNGRRGSLNGVLTVIGQQGHVAYPHLADNPIHRAAPALAELVSIEWDKGNEFFPPTSFQISNIKGGTGANNVIPGTLHVEFNFRFSTQQTEMGLREQVEAIFNRHGFGYELKWTLSGNPFLTPRGDLVDASVAAIQAVNGQATELSTSGGTSDGRFIAPTGAQVMELGPVNKTIHKVNECVAVDDLNALTIIYQKVLERLLGQVSG*