ggKbase home page

ar4r2_scaffold_29933_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(569..1627)

Top 3 Functional Annotations

Value Algorithm Source
Aminotransferase class V n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSM6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 316.0
  • Bit_score: 564
  • Evalue 7.80e-158
  • rbh
Aminotransferase class V {ECO:0000313|EMBL:EIJ34369.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 520 similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 316.0
  • Bit_score: 564
  • Evalue 1.10e-157
Serine-pyruvate aminotransferase similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 309.0
  • Bit_score: 420
  • Evalue 3.90e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGATTGAATCACTTCCCGCGCCCAATATTGTGCCGTTGGAACACATCCTCCCCGACGAACCGTTACTGATGATGGGTGCAGGGCCTGTGCCTATTCCTCAAAAAGTGGCGGCGGCGAACTCGATTGTTATCAATCACCTCGGTGAAACCATGAACCGGGTCATTGAGCAAGTGAAAGACATGGGGCGTTACGTGTTTCAAACCACGTCAAGTCACGTGATGGGAGTCAGCGGCCCCGGCTCGGCGGCAATGGAAATGGCAGTGGCGAATCTGGTGCTACCCGGTGAGCGCGTTTTGTGCATTACCAATGGCTATTTCAGTCAACGTATGGCGGAAATTGTGCGCCGGGTGCGTGCCGAACCCACCCTGCTGGAAGTGGCACACAACGAAAGTGCGGATGTCGCCAGCGTCGAACGCGCCCTGCAACAAGGCCAGTTCAGCGTTGTCACCTTAGTGCAAGGCGAAACCTCCAACACGGTGTGCAATAAAAATCTGGAACACATCGCGAAATTGGCGAAACGCTACGGCTGTTTAGTGATCGTCGACGCGGTTTGCACCTTAAGCACCATGCCGCTGGAAATGGATAATTGGCAAGTCGATGCCATTATCACCGGCGGGCAAAAAGGCTTGTCGTCGATTCCCGGCGTATCATTGTTAGCTTTTTCTGAGAGCGCGTGGGAGAAAAAAATCGCCAACCGCGAAATTCTGCCGTTCCACTGGTGTTTAGATGCGCAACTCGCCGACAAATTCTGGAACCAAAAATCCTACCATTACACCGCGCCGGTTTCCGGCATTCTCGCCTTACACGAAGCCTTGCGTTTGGTGTGTGAAGAAACCTTGCCGCACCGTTTCGAGCGTCATCAACGCTGTTCCGAAGCTCTGCAAGCTGGGATTGAAACCATGGGTTTAAAGCTGTTGATCGAAAAACAACACCGCTTAAATTCCGTGGTNNNNNNNNNNNNNNNNCACGCACTGGGCTCGAGTATGCGTTCTGCTGGTGCAAGTATTGATTTACCCGCAGGCATGGCGGAATTGGAGCGCGTCTTATCCGCCAGTTAA
PROTEIN sequence
Length: 353
MIESLPAPNIVPLEHILPDEPLLMMGAGPVPIPQKVAAANSIVINHLGETMNRVIEQVKDMGRYVFQTTSSHVMGVSGPGSAAMEMAVANLVLPGERVLCITNGYFSQRMAEIVRRVRAEPTLLEVAHNESADVASVERALQQGQFSVVTLVQGETSNTVCNKNLEHIAKLAKRYGCLVIVDAVCTLSTMPLEMDNWQVDAIITGGQKGLSSIPGVSLLAFSESAWEKKIANREILPFHWCLDAQLADKFWNQKSYHYTAPVSGILALHEALRLVCEETLPHRFERHQRCSEALQAGIETMGLKLLIEKQHRLNSVXXXXXXHALGSSMRSAGASIDLPAGMAELERVLSAS*