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ar4r2_scaffold_30391_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1075..1614)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional acivator RfaH n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSD4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 218
  • Evalue 4.10e-54
Transcriptional acivator RfaH {ECO:0000313|EMBL:EIJ34277.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 218
  • Evalue 5.70e-54
transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 170.0
  • Bit_score: 130
  • Evalue 5.40e-28

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
AGTGAAAAGCAAACAATGGTAACAACGCAACGCAGTTGGTATTTACTGACAAGCAGACCTCGGCAAGATGCTCTTGCAGAGGAACAATTATTGAAGCAAAAATACGAAGTGTACCGCCCTTTAGCGCAACGCCTGCATTCGCGTCGCGGTAAAATGCTTACTGTGGTCGAGTCACTATTTCCGCGCTATATGTTTATCCATTTAGATAACGGTGTAGTAGACAACTGGGGACCTATCCGTAGTACACGAGGAGTGAGTGGGTTTGTGCGTTTTGGCATCCACAACTTACCCCCGCCGATCCCGGAATCCTTCATCATTGACTTAAAAGCTGAAGAAAACCGTCTTGGAGAACGTGCGATTGATCTTGACCGCTTCCATAACGGCGATATGGTGGTCATTGACAACGACGGCCCCTTTAAAGGCTTACCAGCTATTTTCCAGCATTACGATGGTGAGCAACGTAGCTTCGTCATGTTGGAAATCTTGCATAAGATGACCAAACTGGCGATTTCACCCGCCGATTTACGTGTAGCGGCGTGA
PROTEIN sequence
Length: 180
SEKQTMVTTQRSWYLLTSRPRQDALAEEQLLKQKYEVYRPLAQRLHSRRGKMLTVVESLFPRYMFIHLDNGVVDNWGPIRSTRGVSGFVRFGIHNLPPPIPESFIIDLKAEENRLGERAIDLDRFHNGDMVVIDNDGPFKGLPAIFQHYDGEQRSFVMLEILHKMTKLAISPADLRVAA*