ggKbase home page

ar4r2_scaffold_44467_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(749..1009)

Top 3 Functional Annotations

Value Algorithm Source
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRY6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 77.0
  • Bit_score: 136
  • Evalue 9.90e-30
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit {ECO:0000313|EMBL:EIJ34129.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioth similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 77.0
  • Bit_score: 136
  • Evalue 1.40e-29
phbC_[H]; Polyhydroxyalkanoic acid synthase similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 77.0
  • Bit_score: 88
  • Evalue 8.60e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGCCGTTTCAAATGCGTCCAGATCAAATTCTGAACGAAGTGAAAACCTTCAACGAAAAACTCGCACAAGGTATGACCAACTTAATGGAAGTCGGCGAGATTTCCACTGGCGTTACCCCGTTTGAGGTGATTTACACCGAAGACAAGCTCAAATTGCTGCATTACACCGGCAACGCCGAGCCAAGCAATAAAGTGCCAATGCTGATTGTGTACGCGCTGGTTAACCGCCCTTGCTGGATGCGGGTCAAGACGTTTATCTGA
PROTEIN sequence
Length: 87
MPFQMRPDQILNEVKTFNEKLAQGMTNLMEVGEISTGVTPFEVIYTEDKLKLLHYTGNAEPSNKVPMLIVYALVNRPCWMRVKTFI*