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ar4r2_scaffold_33355_4

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 1490..1849

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ56_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 221
  • Evalue 5.50e-55
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothri similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 221
  • Evalue 7.70e-55
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 119.0
  • Bit_score: 194
  • Evalue 1.50e-47

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCAAGAGTTAAACGTGGTGTAACGGCACGCGCCCGTCACAAAAAAGTCCTGAAACTGGCAAAAGGTCACTACGGTGCCCGTAGCCGTGTCTATCGGGTTGCACATCAGTCTGTGATCAAAGCAGGTCAATATGCATTCCGTGACCGCCGTCAGAAAAAACGCCAATTCCGCGCTTTGTGGATTGTGCGTATTAACGCTGGTGCGCGTCAGTTCGGTCTGTCTTATAGCCGTATGATGAATGGCCTGAAAAAAGCTGAAATTGCGCTTGACCGCAAAGTTTTGGCTGATTTGGCGGTTCATGACATCGCGGCGTTTGGTGCGGTAGCGGAAAAGGCAAAAGCTGCCTTGGCTGCTTAA
PROTEIN sequence
Length: 120
MARVKRGVTARARHKKVLKLAKGHYGARSRVYRVAHQSVIKAGQYAFRDRRQKKRQFRALWIVRINAGARQFGLSYSRMMNGLKKAEIALDRKVLADLAVHDIAAFGAVAEKAKAALAA*