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ar4r2_scaffold_35304_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(437..1042)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRF5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 165.0
  • Bit_score: 201
  • Evalue 7.60e-49
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EIJ33948.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 165.0
  • Bit_score: 201
  • Evalue 1.10e-48
lytic transglycosylase subunit similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 123.0
  • Bit_score: 138
  • Evalue 2.90e-30

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGTTAGTGAGTATGTCCGCCGTAAGGCGTTGCGCGACGCTGTTGCTTGTGCCTGCTGCGTTTGCGTTTTCCAGCTCTTCGGCTATTGCCGCCTGTGATCAATACGCCCCGCAAGTGTTACATGCGTTGGCGACACCTTACCAGTATGAAATTGTTTCTGCTGCCCGATCCAACGGGGTTAACCCCAATCTCCTGAAAGCAGTGATTACCGCCGAAAGTTGCTTTAAACCCAGCGCAGTGTCCAATAAGGGTGCGGGTGGTTTGATGCAATTGATGCCTGCGACAGCACGGCGTTTTGGGGTGGCGAACCGCTTTGATACCAACGAAAATATCCACGGTGGTGCACGTTATTTGCGTTGGTTGTTAACGCGCTACGGTGGCAGTGTGCCTCATGCTGTTGCTGCTTATAACGCAGGTGAAGGGCGTGTGGATATGTATGGCACGGCAGTACCGTTTCAGGAAACCCAGATGTATACCCGCCGCGTGTTAAATGCTTACCAGAAATTATCTGGTGGGCAGCGTGCGCAGCAGCCCCAAGTGATTCGTGGCGGAAAGTCTGGTAGCTGTGAAGTCGTTACCCACAGTTTATACACGATTCATGGCTAA
PROTEIN sequence
Length: 202
VLVSMSAVRRCATLLLVPAAFAFSSSSAIAACDQYAPQVLHALATPYQYEIVSAARSNGVNPNLLKAVITAESCFKPSAVSNKGAGGLMQLMPATARRFGVANRFDTNENIHGGARYLRWLLTRYGGSVPHAVAAYNAGEGRVDMYGTAVPFQETQMYTRRVLNAYQKLSGGQRAQQPQVIRGGKSGSCEVVTHSLYTIHG*