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ar4r2_scaffold_1077

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1077_1
unknown

Not on your lists

1..87
DNA (87bp) protein (29aa)

This feature has no annotations

ar4r2_scaffold_1077_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227..1885
DNA (1659bp) protein (553aa)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis pro
Probable protein kinase UbiB n=1 Tax=Beggiatoa alba B18LD RepID=I3CDP7_9GAMM rbh
2-polyprenylphenol 6-hydroxylase
ar4r2_scaffold_1077_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2515..4554
DNA (2040bp) protein (680aa)
Cadmium-transporting ATPase n=1 Tax=Beggiatoa sp. PS RepID=A7BQK6_9GAMM rbh
Cadmium-transporting ATPase {ECO:0000313|EMBL:EDN71178.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
cadmium-transporting ATPase
ar4r2_scaffold_1077_4
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4566..5492
DNA (927bp) protein (309aa)
Gluconolactonase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1I4_ALCXX rbh
Gluconolactonase {ECO:0000313|EMBL:KGD99026.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
SMP-30/gluconolaconase/LRE domain-containing protein
ar4r2_scaffold_1077_5
unknown

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5557..6486
DNA (930bp) protein (310aa)

This feature has no annotations

ar4r2_scaffold_1077_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6600..7736)
DNA (1137bp) protein (379aa)
Cytochrome Ni/Fe component of hydrogenase-2 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYL7_9PROT rbh
polysulfide reductase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hydrogenase
ar4r2_scaffold_1077_7
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7739..8734)
DNA (996bp) protein (332aa)
Hydrogenase-2 operon protein hybA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANV1_AZOBR rbh
Hydrogenase 2 4Fe-4S ferredoxin-type component {ECO:0000313|EMBL:CDH43979.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" sou
hybA; hydrogenase-2 operon protein hybA
ar4r2_scaffold_1077_8
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8746..9909)
DNA (1164bp) protein (388aa)
Hydrogenase 2 small subunit {ECO:0000313|EMBL:AKH19111.1}; EC=1.12.99.6 {ECO:0000313|EMBL:AKH19111.1};; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="S
hupS; Uptake hydrogenase small subunit precursor (Hydrogenlyase) (Membrane-bound hydrogenase small subunit) (EC:1.12.99.6)
Ni,Fe-hydrogenase I small subunit n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYL9_9PROT
ar4r2_scaffold_1077_9
unknown

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comp(10123..10257)
DNA (135bp) protein (45aa)

This feature has no annotations

ar4r2_scaffold_1077_10
unknown

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comp(10267..10404)
DNA (138bp) protein (46aa)

This feature has no annotations

ar4r2_scaffold_1077_11
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10483..12495
DNA (2013bp) protein (671aa)
Signal transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BUR1_9GAMM rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EDN69725.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa s
signal transduction histidine kinase
ar4r2_scaffold_1077_12
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12586..13314
DNA (729bp) protein (243aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Beggiatoa alba B18LD RepID=I3CKF7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH21874.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
ar4r2_scaffold_1077_13
unknown

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13317..13529
DNA (213bp) protein (71aa)

This feature has no annotations

ar4r2_scaffold_1077_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13808..14809)
DNA (1002bp) protein (334aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Beggiatoa alba B18LD RepID=I3CJP3_9GAMM rbh
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:EIJ43836.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; T
C4 dicarboxylate binding protein
ar4r2_scaffold_1077_15
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15185..16237
DNA (1053bp) protein (351aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Beggiatoa alba B18LD RepID=I3CK24_9GAMM rbh
ABC transporter permease rbh
ABC transporter permease {ECO:0000313|EMBL:BAP55689.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1077_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16234..17271
DNA (1038bp) protein (346aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NMX9_9DELT
peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:BAP55690.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingric
ar4r2_scaffold_1077_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17568..19286
DNA (1719bp) protein (573aa)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Beggiatoa alba B18LD RepID=U5FCF6_9GAMM rbh
acetolactate synthase, large subunit, biosynthetic type
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:BAP56629.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" s
ar4r2_scaffold_1077_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19288..19782
DNA (495bp) protein (165aa)
Acetolactate synthase, small subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CIF0_9GAMM
acetolactate synthase, small subunit
Acetolactate synthase, small subunit {ECO:0000313|EMBL:BAP56628.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca in
ar4r2_scaffold_1077_trna_1
unknown

Not on your lists

comp(19951..20024)
DNA (74bp)
transferRNA
ar4r2_scaffold_1077_19
unknown

Not on your lists

20298..20714
DNA (417bp) protein (139aa)

This feature has no annotations

ar4r2_scaffold_1077_20
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20845..21609)
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FXM0_OCESG rbh
methionine aminopeptidase
ar4r2_scaffold_1077_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21889..22740)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4HFN0_MICAE
Uncharacterized protein {ECO:0000313|EMBL:ETK34328.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
ar4r2_scaffold_1077_22
unknown

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comp(22788..22955)
DNA (168bp) protein (56aa)

This feature has no annotations

ar4r2_scaffold_1077_23
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22993..24072)
DNA (1080bp) protein (360aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CET5_9GAMM rbh
histidinol-phosphate aminotransferase
ar4r2_scaffold_1077_24
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24127..24624)
DNA (498bp) protein (166aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1247649 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Bordetella holmesii RepID=M5NJW0_9BORD
cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein
ar4r2_scaffold_1077_25

Not on your lists

comp(24728..25039)
DNA (312bp) protein (104aa)
Protein involved in sulfur oxidation DsrR n=1 Tax=uncultured bacterium ws034A6 RepID=I1X562_9BACT
Protein involved in sulfur oxidation DsrR {ECO:0000313|EMBL:AFI78637.1}; TaxID=1131824 species="Bacteria; environmental samples.;" source="uncultured bacterium ws034A6.;"
protein involved in sulfur oxidation DsrR
ar4r2_scaffold_1077_26
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25142..27841)
DNA (2700bp) protein (900aa)
Methyl-accepting chemotaxis protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CL18_9GAMM
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAP57466.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ing
ar4r2_scaffold_1077_27
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27860..33526)
DNA (5667bp) protein (1889aa)
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VPC2_9CYAN
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors {ECO:0000313|EMBL:AFZ09943.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="O
adenylate/guanylate cyclase with GAF and PAS/PAC sensors
ar4r2_scaffold_1077_28
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34051..34431
DNA (381bp) protein (127aa)
Protein containing DUF498 n=1 Tax=Beggiatoa sp. PS RepID=A7C610_9GAMM
Protein containing DUF498 {ECO:0000313|EMBL:EDN65774.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
Displaying 29 items

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