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ar4r2_scaffold_1324_38

Organism: ALUMROCK_MS4_Beggiotoa_37_524

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(41248..41805)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Beggiatoa alba B18LD RepID=I3CH10_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 181.0
  • Bit_score: 176
  • Evalue 1.80e-41
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 174.0
  • Bit_score: 203
  • Evalue 6.70e-50
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:BAP56190.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thio similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 174.0
  • Bit_score: 203
  • Evalue 3.40e-49

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Taxonomy

Thioploca ingrica → Thioploca → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGAGAGAATTGTCTGAACTTTCTGATGATGCACTCATGCAACGAATCCAACAACAAGATGAACAGGCGTTTACACTATTGGTAGACAGGTATATGACTGCTTTACATGGTTTTGTTTGGCGTATGTTAGGCAATTCCAGTGATGTTGAAGATATTGTACAAGAAACTTTTCTGCGGGTTTGGTATCGTGCTGAACAATGGCAAGAAGGTCGAGCAAAATTATCCACCTGGATGCATCGCATCGCCCATAATCTATGTATAGATTTATATAGACAAAATCGTGGTATCAAAGTAGATATTGAATTAGAAGAAGTGCAGAACTTAGCAACAACAACACAACCTGAAGACATCTGGTTACAAGCAGAAATATCTCAACAAGTGGAGCATGCATTACAAGCATTACCTGAAAAACAACGCAGTGCTGTTATCTTATGTCATTATCAAGGCATGAGTAATCGTCAAGCAGCAGAAGTAATGGATGTAAGCGTTGCCGCTTTAGAATCCTTACTAGCAAGAGGCAGAAAAACGTTGCGAGTGAAATTAACAATTAATTCATGA
PROTEIN sequence
Length: 186
VRELSELSDDALMQRIQQQDEQAFTLLVDRYMTALHGFVWRMLGNSSDVEDIVQETFLRVWYRAEQWQEGRAKLSTWMHRIAHNLCIDLYRQNRGIKVDIELEEVQNLATTTQPEDIWLQAEISQQVEHALQALPEKQRSAVILCHYQGMSNRQAAEVMDVSVAALESLLARGRKTLRVKLTINS*