ggKbase home page

ar4r2_scaffold_3015_1

Organism: ALUMROCK_MS4_Desulfocapsa_53_168

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(384..833)

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein PilT Tax=RBG_13_Nitrospirae_41_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 141.0
  • Bit_score: 143
  • Evalue 1.90e-31
Putative toxin-antitoxin system toxin component, PIN family id=2212973 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 138.0
  • Bit_score: 112
  • Evalue 3.40e-22
toxin-antitoxin system toxin component, PIN family similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 136.0
  • Bit_score: 99
  • Evalue 1.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Nitrospirae_41_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 450
GTGAGAAAAAAGCAGCGCATTAGGGCGGTACTTGATACAAATCTGTTTGTAAGCGGCCTCTTTGCCTTGCATGGCACTATTGCCAGGCTACAGCAATTATGGGTTTCCGGTGCTTTTGAGTTGGTTGTTTCCGAAGATATTCTTCAAGAGATTGAAGAAACCCTTCAGAAGCCTTCCATCCGGAAGGAACTGTTTCTAAAAACGGAAGAGATCGGCGAGATTGTGAGTCTGATTCGGGAAAAGGCCTTTGTGGTGACCAAGGATCTCTATAAAACCGACAAGATCACTGCCGACCCTGATGACAACAAGTTTCTCGCTTGCGCCTTGGAGACCAAGGCGGATTACATTGTCTCGGGCGACAATCATCTCCTTTCCCTGAAGCATTTTCAGAGAATCCAGATCGTTGATGCGGTTACTTTTATTAAAAAAGTAGACGAGCAAAGAACGTAG
PROTEIN sequence
Length: 150
VRKKQRIRAVLDTNLFVSGLFALHGTIARLQQLWVSGAFELVVSEDILQEIEETLQKPSIRKELFLKTEEIGEIVSLIREKAFVVTKDLYKTDKITADPDDNKFLACALETKADYIVSGDNHLLSLKHFQRIQIVDAVTFIKKVDEQRT*