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ar4r2_scaffold_531_21

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 22923..23183

Top 3 Functional Annotations

Value Algorithm Source
RNA chaperone Hfq n=1 Tax=Thiomicrospira arctica RepID=UPI00035E2171 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 82.0
  • Bit_score: 126
  • Evalue 1.70e-26
host factor Hfq; K03666 host factor-I protein Tax=CG_Thiomicrospira_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 80.0
  • Bit_score: 126
  • Evalue 2.40e-26
hfq; Host factor I for bacteriophage Q beta replication, fragment similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 82.0
  • Bit_score: 125
  • Evalue 6.40e-27

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Taxonomy

CG_Thiomicrospira_01 → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGTCAAAAGCCCAACCGATTCAAGATCCCTATTTAAATGCGTTACGTAAAGATCGTATTCCGGTCTCTATTTATTTAGTTAACGGCGTTAAGTTGCAAGGTCGTGTCGATTCATTTGACCAATTTGTGGTGATGTTGCGTTCAACCGTATCGCAAATGGTTTACAAACATGCCATTTCAACCATTGTGCCAGCAAGAGATCCGAAAGGTTACTTTGGTGGTGAAGAAGGTGATGAAAGCAATGAAACGGCAGGTGAATAA
PROTEIN sequence
Length: 87
MSKAQPIQDPYLNALRKDRIPVSIYLVNGVKLQGRVDSFDQFVVMLRSTVSQMVYKHAISTIVPARDPKGYFGGEEGDESNETAGE*