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ar4r2_scaffold_1154_21

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(12535..13752)

Top 3 Functional Annotations

Value Algorithm Source
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8T0_THICA similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 409.0
  • Bit_score: 196
  • Evalue 3.80e-47
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 409.0
  • Bit_score: 196
  • Evalue 1.10e-47
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|SAAS:SAAS00035571}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pisci similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 409.0
  • Bit_score: 196
  • Evalue 5.30e-47

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Taxonomy

Thioalkalimicrobium cyclicum → Thioalkalimicrobium → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCTTCGCACGCATCGCAAAGCTTGGTTGCCAATACAGCAAACCCCTAAGCCTATTCACCAGGTCGCTATCATCGGTGCTGGTATCGCTGGTGCAGCCTTAGCTGAAACCTTGGCTCATGCAGGGCTAAGCGTTGATATTTTTGAGCAAGCATCGGAACCAGCAAGTGGCGCTTCAGGCAATTTGGCGGGAAACTGTCTACCGATTATCGATCAACGCCCCGATAACCCTTATGCGCAATGGCATTGGCTGGCTTGGCAAGCTACCCTTGATTGGTGGCATCAACAACCCAATCGAACCGAACTAGGCAATTTGACCGGTGCGGCGAAATGGTCTCATAACGCTAAAACCTTGGCGGGTTGGAAAGTTTGGGCTGAACAGCATGACGCTAGTCAAGTTTATTGGATGGACAACTTACCCCTGCCCCATCAACCGGCTGGGCTCTGGTTTCCACAAGGGGGCAGCCTTTACCCCAAAGCTCTGGTTAAACGCTTACTGACGCCCCGAAATATTCAACTACACACCAACACCTTAATTAACCAAATTCACCACACTGGTGATACTTGGCAACTGATTTCCCAGCAACAAACCTTTACGGCGGACGCCATCATCATTGCCAGTGGCGCACAAACTTCACTCGCTTTTGCGGACTGGGGAAGTGTATTACAACTCAATAAGGGGCAAGTGTCTCATTTGCCGGTTTCGGCATGGCAAAGCCCGCCAGAGTTTGCTTTATCTTACGGCGGCTATGTTGCCACCACCGCAGAGGGCATCAGCTGTATCGGTGCCACCTTTGAGCAACAGGCGCCACTAGGACTAACTGAAAGCGGACATCACCATAATTTAGCCTTACTCAATCAAGCTTATCCGAATGCTTTGCATGACAGTGTTTTTCCTAATCAAGGACATAGCGCTTATCGCGCTAATACCACCGATCATCTTCCCTTGGTGGGTCCGGTAGTGGATATTCCCACTTATCAAGCCGCCATTCAGGCACGGTGCCATCAGCCAGACACCATTCCCGACCTATCTGCTTTGCTGCAACCGCATCTGTGGATGAGCATTGGACATGGTTCACATGGCTTAACCTCTGCCTTCTTAGCCGCCAAACTCATTCGACAACAATTGCTTAATCAATCTAGCGATTTAAGTCTTAACTTACAACAAGCCGTTCATCCGGCGCGCGCCATTTTTCGTCAGACTTGTTACCCAAACTAA
PROTEIN sequence
Length: 406
MLRTHRKAWLPIQQTPKPIHQVAIIGAGIAGAALAETLAHAGLSVDIFEQASEPASGASGNLAGNCLPIIDQRPDNPYAQWHWLAWQATLDWWHQQPNRTELGNLTGAAKWSHNAKTLAGWKVWAEQHDASQVYWMDNLPLPHQPAGLWFPQGGSLYPKALVKRLLTPRNIQLHTNTLINQIHHTGDTWQLISQQQTFTADAIIIASGAQTSLAFADWGSVLQLNKGQVSHLPVSAWQSPPEFALSYGGYVATTAEGISCIGATFEQQAPLGLTESGHHHNLALLNQAYPNALHDSVFPNQGHSAYRANTTDHLPLVGPVVDIPTYQAAIQARCHQPDTIPDLSALLQPHLWMSIGHGSHGLTSAFLAAKLIRQQLLNQSSDLSLNLQQAVHPARAIFRQTCYPN*