ggKbase home page

ar4r2_scaffold_4150_13

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(10314..11144)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 273.0
  • Bit_score: 288
  • Evalue 1.20e-74
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 271.0
  • Bit_score: 287
  • Evalue 4.10e-75
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036BCDF8 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 277.0
  • Bit_score: 289
  • Evalue 2.90e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylophaga aminisulfidivorans → Methylophaga → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCCCGAATTACCCGAAGTTGAAACCACAAGACGTGGTATAGCACCTTACATAAACCAACAGAAATTATCACGGGCTATCATACGTCAAGCGAAGCTTCGCTATCCGATCCCTGTTGAAGCACTCAACAACCTGATCGGACAGGTGTTAATTTCGATAGAACGACGTGCCAAGTATTTACTGCTCACATTCAACACCTCATCCCTGATGATCCACCTAGGCATGTCGGGTAGCTTGCGCATTGTTTCAACGGATGCAGAATGGCGTAAACACGATCATTGGCAACTGGATTTTGGTGAAATCTCACTCAGGTATCATGACCCTCGCCGCTTTGGATTTCTTATTGTTACCGATGACATCTCAAATCATCCATTGATACGCAAACTCGGCCCAGAACCCTTAAGCGATGTCTTCAATTGTCATTATTTACAACAACAATTTGATCAACGCAAATCTCCCATTAAATCTAGCTTAATGCATAATGAGTTAGTTGTTGGCATCGGCAATATTTACGCCTGTGAATCGCTTTTCTTGGCGGGCATCCACCCTCTCACCCCCTGTCATCAATTAACAACCAACCAAATATGTCAGTTACACCAACACATTCAAGCCACGCTGAAACGCGCCATTGAACAAGGCGGCAGCACGCTCAGGGACTTTGTTAATCCCGATGGTCAGCCAGGCTATTTTGCTCAAACCTTGAATGTTTATGGACGTGTCCATCAAGCCTGCCATAGCTGTGCAACGCCGATTGAGAATTTACGTATTGCGCAACGCTCAAGCTATTACTGCCCTCAGTGTCAACCGCTAAACTCAGGTAATAATCAATGA
PROTEIN sequence
Length: 277
MPELPEVETTRRGIAPYINQQKLSRAIIRQAKLRYPIPVEALNNLIGQVLISIERRAKYLLLTFNTSSLMIHLGMSGSLRIVSTDAEWRKHDHWQLDFGEISLRYHDPRRFGFLIVTDDISNHPLIRKLGPEPLSDVFNCHYLQQQFDQRKSPIKSSLMHNELVVGIGNIYACESLFLAGIHPLTPCHQLTTNQICQLHQHIQATLKRAIEQGGSTLRDFVNPDGQPGYFAQTLNVYGRVHQACHSCATPIENLRIAQRSSYYCPQCQPLNSGNNQ*