ggKbase home page

ar4r2_scaffold_4710_8

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 6208..7785

Top 3 Functional Annotations

Value Algorithm Source
Capsular exopolysaccharide family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNA4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 464.0
  • Bit_score: 276
  • Evalue 4.80e-71
Capsular exopolysaccharide family {ECO:0000313|EMBL:EIJ32847.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nive similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 464.0
  • Bit_score: 276
  • Evalue 6.80e-71
gumC; exopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 472.0
  • Bit_score: 177
  • Evalue 1.10e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
GTGACGATACCGCTAATGTCTGATCCGGTGTTATTAGCTCGAAATCGCCCGTTGTTGCCAACGTATTCGTTGGGGGCGCGACTCTTGCGTCAGGCTGGGATCATCGTGAGTTGTGTGTTGCTGGCAATCGTTGCGGTAATGTATTGGCTGTCGCAAACTGAGCCGCTTTACCGTGCGGTTGCTACCATGCAGCTTGAAAAAGAGCGGGTTAAGATTACCGAAGCGAATATCCTAGAGCGCAGCAAAATCAGCATGGCATTGGATGATCCATTCCTTTATACCCAGTATGAGAAATTGAAAAGCCGCGCATTGGCGGAAAAAGTCATTCGTGAAGTCAATTTACCTGTAACGGCTTTGGCAGCGGCTGATCCGGCGGCGGATTTGTTGGCTAAATTGCATATTGAGCCAGTGGCACGTACTCAGTTACTGAAAATTCATTACGAAAGTAGCGATTCTGCTTTGGCAGTAGCGGTGGTTAATGGCGTGATGGATACACTTATTCAGTTAAATCAGGAATCCCAGCCACCGACGATTAATTTATTGCGAAAAATGCAAACCTTGAAGGTGGTTAGTGATACCTTCATGCCGTCACTTGAAGTGGTAGAACGCGCTCGGTTATGGCATATCCCGTGGTATACGCAGTACTTAGGAACGGTTCTCGGAGCAATATTAGGTGGTTTGTTATTAGGCGTAATGTTGGCGTTATTGCGTGAAAGATTTGGTAAAAAACCAATGTCAGCCAATGCCTTGCAAGTGATGAGTGGTTTGCCAGTGTTGGGTTCGATTCCGCGTGTACGTGGTTTTGCGAAACGCCGTTTGGTGCAGACAGCATTGCGTAACGTGGGTTCGCCTGCCGCAGAAGCGTATCGTGTTGCCACTGCAAATTTGCATTTTAGCGGAGTAAATCGTGCGCCGCAGATTACCTTATTGACCAGTGTAAACGCAGCGGAAGGTAAGTCGACATCGGCGGCCTACGTTGCGATTCAGCAAGCGCGTCAGGGCTTAAAAGTGCTGTTGATTGATGCTGATTTGCGTAAGCCGTCATTGCACCGGTATTTGGGTGTCACGAATCGGCGCGGTTTAAGTGATTATTTACGCGGTGATGCGGAGGTGGCAGCAATGACGCAGATGATACCGCAAGTGAAGGGTTTGTATTTCTTGGCAGCAGGCGGCAAAGTGCAGCATCCGACCAATTTGCTTGCACAGCCCAGTTTGTCGCTTTTATTGCGACGGGCGACGCAATATTTTGACAGCATTGTGATTGACGCATCAACCTTGGTGGGGTTTGCTGATGTGTTGTACTTAAGCGCGTTAGCCGATGCTACTTTGATTGTTACTAATGCAGAAAATGTTAACCCGATGCGCTTATTACATGCTGTTGAACAGTTACATCGAGTAAAATCTAATATTGTGGGTTGTTTAATGCTGAAATCACCGGAAAATGCCCCGGATTACCGTCATTATCGCTTGCATCAACAATACGCCAGTGAGCATCAAAGCTTACCAGCAGTTGTTAAGCATAAACGTAAAGGCTTAAATTTGGCGTTAACTCCGAATGCCAATGCCACGGTGCAGTAA
PROTEIN sequence
Length: 526
VTIPLMSDPVLLARNRPLLPTYSLGARLLRQAGIIVSCVLLAIVAVMYWLSQTEPLYRAVATMQLEKERVKITEANILERSKISMALDDPFLYTQYEKLKSRALAEKVIREVNLPVTALAAADPAADLLAKLHIEPVARTQLLKIHYESSDSALAVAVVNGVMDTLIQLNQESQPPTINLLRKMQTLKVVSDTFMPSLEVVERARLWHIPWYTQYLGTVLGAILGGLLLGVMLALLRERFGKKPMSANALQVMSGLPVLGSIPRVRGFAKRRLVQTALRNVGSPAAEAYRVATANLHFSGVNRAPQITLLTSVNAAEGKSTSAAYVAIQQARQGLKVLLIDADLRKPSLHRYLGVTNRRGLSDYLRGDAEVAAMTQMIPQVKGLYFLAAGGKVQHPTNLLAQPSLSLLLRRATQYFDSIVIDASTLVGFADVLYLSALADATLIVTNAENVNPMRLLHAVEQLHRVKSNIVGCLMLKSPENAPDYRHYRLHQQYASEHQSLPAVVKHKRKGLNLALTPNANATVQ*