ggKbase home page

ar4r2_scaffold_7200_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 2..352

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=870187 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 114.0
  • Bit_score: 218
  • Evalue 4.80e-54
Transcription-repair-coupling factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 114.0
  • Bit_score: 218
  • Evalue 3.50e-54
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 114.0
  • Bit_score: 202
  • Evalue 5.50e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
TACCACCAGCGTTTCCAGATTCTGATTGCCACCACCATCATTGAAAGCGGCATCGACGTGCCGACCGCCAACACGATTTTGATCAACCGTGCCGACAAACTGGGGCTGGCGCAGTTGCACCAGTTACGCGGACGGGTCGGGCGTTCGCACCACCGCGCTTATGCTTATTTGATTGCGCCGCCGAAATCCGCGCTTACGCCGGATGCGGTCAAGCGGCTGGAAGCGATTGAATCACTGGAAGAACTGGGGGTCGGTTTCACGCTGGCAACGCACGATCTGGAGATTCGCGGTGCGGGCGAATTGCTGGGCGAAGGGCAAAGCGGGCAGATTCAGGAGATCGGAGGGGTGTAG
PROTEIN sequence
Length: 117
YHQRFQILIATTIIESGIDVPTANTILINRADKLGLAQLHQLRGRVGRSHHRAYAYLIAPPKSALTPDAVKRLEAIESLEELGVGFTLATHDLEIRGAGELLGEGQSGQIQEIGGV*