ggKbase home page

ar4r2_scaffold_14876_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 2..646

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=870187 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 214.0
  • Bit_score: 409
  • Evalue 3.60e-111
Transcription termination factor Rho n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVZ7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 214.0
  • Bit_score: 409
  • Evalue 2.50e-111
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 214.0
  • Bit_score: 380
  • Evalue 2.70e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTCTTGCTTATTGATGAGCGTCCTGAAGAAGTGACCGAAATGCAACGTATGGTGCATGGTGAGGTTGTTTCTTCCACCTTTGATGAGCCAGCCGCACGTCACGTACAGGTCGCGGAAATGGTCATTGAAAAAGCCAAGCGTTTAGTTGAACACAAGCGTGATGTGGTGATTCTGCTGGATTCCATTACGCGTTTAGCACGTGCCTATAATACTGTTGTGCCGTCGTCTGGTAAGGTATTGACGGGTGGTGTTGATGCGAATGCTTTACATCGTCCCAAGCGTTTCTTCGGTGCGGCACGTAATATTGAAGAGGGCGGTAGTTTAACCATTATTGCTACAGCTTTGATTGATACTGGTTCCAAAATGGACGAGGTTATCTACGAAGAATTCAAGGGTACGGGCAATATGGAAATCCACTTGGATCGTCGTATTGCTGAAAAGCGCGTATTCCCAGCGATCAATATTAACCGCTCTGGTACACGTCGTGAAGAATTGTTAACGACGCAAGACGAGCTGCAAACGCTATGGGTATTGCGTAAATTCTTGCATGGTATGGATGATTTGGATGCAATGGAATTGCTGTTCGACAAGTTATCGAAAACCAAGACTAACAGTGAATTCTTTGACGTAATGCGTCGGGGTTAA
PROTEIN sequence
Length: 215
VLLIDERPEEVTEMQRMVHGEVVSSTFDEPAARHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEIHLDRRIAEKRVFPAININRSGTRREELLTTQDELQTLWVLRKFLHGMDDLDAMELLFDKLSKTKTNSEFFDVMRRG*