ggKbase home page

ar4r2_scaffold_27691_2

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49

near complete RP 41 / 55 MC: 3 BSCG 46 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 610..978

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly PilZ n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNM1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 107.0
  • Bit_score: 154
  • Evalue 6.50e-35
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EIJ32964.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 107.0
  • Bit_score: 154
  • Evalue 9.00e-35
pilus assembly protein PilZ similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 106.0
  • Bit_score: 94
  • Evalue 2.90e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGGAAAAGCCCGAAGGCGGCACTGTCGGTCATAACGTTAATCGCAATCTTTCGTTAACCGTACCTGATAAGCACTCGCTACACGCTACTTACATGCCGTTTATTAAAAATGGTGGCATCTTCGTGCCTACTCATGAGCGGTTTGCGCTGCATGACAATGTAGTCCTGCAATTACGTCTAATCGAAGAAGGTAAGCGTCTATTGATTCCGGGAAGAGTTGTCTGGATTACTGGCGGCAAGGGTCAGCACGGTACACCCGCTGGTGTTGGCTTACAATTTACTGGTGAACAACAAGCTCGCATCCGCCAGTTTCTGGAAGAGGTCATGGGCGATCTCATCAAACAACCTGCACAAAATCCTACTTACTAA
PROTEIN sequence
Length: 123
MEKPEGGTVGHNVNRNLSLTVPDKHSLHATYMPFIKNGGIFVPTHERFALHDNVVLQLRLIEEGKRLLIPGRVVWITGGKGQHGTPAGVGLQFTGEQQARIRQFLEEVMGDLIKQPAQNPTY*