ggKbase home page

ar4r2_scaffold_3610_4

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38
Location: comp(3874..6222)

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L087_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 750.0
  • Bit_score: 437
  • Evalue 2.40e-119
organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 750.0
  • Bit_score: 437
  • Evalue 6.90e-120
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Haloth similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 750.0
  • Bit_score: 437
  • Evalue 3.40e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2349
TTGAATACTCGTAGGGTGGATAAGTGTAGCGCATCCACCGATGCCACCAAGGTGGATGCGCTACGCTTATCCACCCTACTCGACGCGGTGACCTCTGTGGCTAATTTCTTCCGGATTTCACTGCGCACCGCAGCCTTACTCCTGCTGCCCATATTCCCCGCATGGAGCGCGAATAACTTCGCCCTCTGCCCGCCGTTTTTACCCGAACTGCCCAACCTGCCTGCACTTGAGGCCAACACGCCCGCGCAGGCCGCCGCCGACCGTGGGCGCTATGACGGCAATCTGGCAAACCTCGAAGGCGCGGCGCAGTTGCAATACGCCGACCAACGCCTGCTGGCCGAGCGCATTGACTACACCCTAAACCCGGAAAACATCACCGCCCAAGGCGCACTGCGTTATTGGGACAGCACGCGCATCCTGTTTGCCGAACGCGGCGTATTCCAACCGAAGCTAGAACAAGGCCAGGCTGAAAATGTGCGCTTTTGGCTGCCCGCGCCGCACCTCTCTGGCACAAGCTCGCAAGTCACCCGCCTGAATGCCCAGCAAGACCAGCTCAAAGAGGTCAGTTTAAGCAGCTGCCCCGAACCCCAAGCGGGAGAAGTGCGCGACTGGACGCTCAACGCATCGCGAGTTGATCTCGACCATGCCACCGGGCGCGGCGTGGCACGCGATGCTTGGCTGAACTTCAAAGGCGTGCCGCTGATGTACGCGCCCTATTTTGATTTTCCGCTGGATGATCGCCGCGCTACTGGCTTTCTTTATCCTAGCGTCAACTACAACAGCCAAGTCGGTGCCAGTGTCACCGTGCCCTACTACTGGAATATTGCCCCCGACCGCGATGCCACCTTCACCCTGCGCCCCATGACCCAGCGCGGCGTGATGCTCGGTGGCGAATACCGCCAGTTGTGGCAAGAGGGGCAAGGCAAGCTTCGCGGCGAATGGTTGCCCTATGACAATGACAGCGGCGAATCGCGCTATCTCTATGATATTCAAGCGCAACAGCGCCTTGATGCCTGGGATGGCTCGCTCGCCGTGCGTCGCGTCTCGGACATCAACTACATGCGGGATTTTGGTACGTATTCCACGCTCAGCAACACGGCGTATCTTGAATCGCACCTTCGCGCCAATCGCAATTTTAATACCGCATTCAATGACCAGCCCGGACAATGGAATCTCTCGCTTTTAGCGCAGGAATACCAAAACTTGAGCTTCAGCGTGAACGACTCAAACCTGCCCTACAAACGGATGCCGCAAGTCCTGCTGTCCGGCGAACAGGCGTTGGGGCCGCTGCGCCTAAACCTTCTGACCGAAGCCGTGCGCTTTCAGAGCGAGTACGTCAACAACCCGGAAGGCGAGCGCTACGCCATCATTCCCACGCTCTCGCTGCCACTGGGCGAACGCTGGTACAGCATTACCCCGAGCGTCGGCCTGACCAGCCTGCAATACCAAATCGACACGCCGAATGTGTCGTCGCAGAATATCCCCGTGAGCAGTGTGGATGCACGTTTTTTCTTCGACCAGTACGGCGAACATTTCAACCAGCAACTCGAACCGCGCCTGTACTACCTCTACGTGCCCTACTACGAACAAAACGCGCCGCTGTTCGACACTGATTTGCCGCTGCCCAGCCTGTCACGCTTGTTTGCGTCCAACCGCTTTATTGGCCGCGACCGCCAAGGCGATGCCAATGCCCTCAGCTACGCCATGACTTGGCGCGCCTTGGATGCCAAGGAAGGTTACGAGCGCCTAAGCTTGGGTATCGGCCAGCAATACCGCTTCAGCGAAGAGCGCGTCACCCTCAACCCCGGCGACCCGATCACCCCAAGCGGCGCAGGTGAAGCCATTTTTGAGCTCAACGCAGGCTTTAGCCGCGAATGGAGCACACGCATGACCGCCTCTGAAAGCCAAACCTACGCCGTATTGAGTTACCGTCCGCTGCAACGTGCCTCGGCGGAGGAACTGCCACATCAACAGCGCGCCATCAATCTGTACTACGGCAACCAAGCCGACACGCCCGGTCTGCCAAACCTCAACCAAATCGGCCTCTCATGGGTCTGGCCACTGAGTCGCCAATGGCAAATCCTCGGCAATGTCGCCCAAGACCTTGATGCGCAAAAACCCGTCCAGCTCCTCGCGGGCCTGGCCTATGAAAGCTGCTGCTGGCGGATCAAATTCGGTGCCGAATACTACGCCGTCAGCAACCCGAACCCCGACATCGTGGAATACTCCACCTCAGCACTATTGCAATTTGAACTCAAGGGTTTAGGCAGTGCCGGCTCACAAGCTGACCGACGCTTTGAACGTGCTATTCTTGGTTATCAGCCGGATAGTCCATCTCGATTTCAATAG
PROTEIN sequence
Length: 783
LNTRRVDKCSASTDATKVDALRLSTLLDAVTSVANFFRISLRTAALLLLPIFPAWSANNFALCPPFLPELPNLPALEANTPAQAAADRGRYDGNLANLEGAAQLQYADQRLLAERIDYTLNPENITAQGALRYWDSTRILFAERGVFQPKLEQGQAENVRFWLPAPHLSGTSSQVTRLNAQQDQLKEVSLSSCPEPQAGEVRDWTLNASRVDLDHATGRGVARDAWLNFKGVPLMYAPYFDFPLDDRRATGFLYPSVNYNSQVGASVTVPYYWNIAPDRDATFTLRPMTQRGVMLGGEYRQLWQEGQGKLRGEWLPYDNDSGESRYLYDIQAQQRLDAWDGSLAVRRVSDINYMRDFGTYSTLSNTAYLESHLRANRNFNTAFNDQPGQWNLSLLAQEYQNLSFSVNDSNLPYKRMPQVLLSGEQALGPLRLNLLTEAVRFQSEYVNNPEGERYAIIPTLSLPLGERWYSITPSVGLTSLQYQIDTPNVSSQNIPVSSVDARFFFDQYGEHFNQQLEPRLYYLYVPYYEQNAPLFDTDLPLPSLSRLFASNRFIGRDRQGDANALSYAMTWRALDAKEGYERLSLGIGQQYRFSEERVTLNPGDPITPSGAGEAIFELNAGFSREWSTRMTASESQTYAVLSYRPLQRASAEELPHQQRAINLYYGNQADTPGLPNLNQIGLSWVWPLSRQWQILGNVAQDLDAQKPVQLLAGLAYESCCWRIKFGAEYYAVSNPNPDIVEYSTSALLQFELKGLGSAGSQADRRFERAILGYQPDSPSRFQ*