ggKbase home page

ar4r2_scaffold_12839_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38
Location: comp(2..724)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1172194 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 233.0
  • Bit_score: 229
  • Evalue 4.40e-57
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037A3B77 similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 233.0
  • Bit_score: 230
  • Evalue 1.80e-57
ribonuclease D similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 232.0
  • Bit_score: 225
  • Evalue 2.20e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
GTGTCTGAACTTTCAATGAACGGCCTGCTGCAAAGTCAGGCCGATTTTGTTTCTGCGCTTGCCACGCTCGCGCCCAGCCCGGTTTTGGCGCTGGATACCGAGTTCATGCGCGAGCGCAGTTATCGCCCCCAGCTCTGCTTAATTCAGTTGGGCAACGCGACGCAACAAGTGTGTGTCGATCCTTTGCACCTTGAAGACTTGGAGCCTTTGGGCGCGCAGCTTGCCGATACGCGGCAAATCAAGCTCGTTCACGCGGCGGCGCAGGATTTAGAAGTGCTGCACCAGCGTTTAGGCGTGCTACCCGCGCCGCTGTTTGATACCCAATTGGCCGCCACCCTCTGCGGCATGGGCGAGCAAATGGGCTATGCCAACTTGATTGAACAGTTGCTCGGTGTGGTGTTAGACAAAACCTCCAGCCGCACGGATTGGTCGCAGCGGCCACTCTCGGCGGAGCAATATCGCTATGCCCTTGATGATGTACGCTATCTGCCTGAAGTTTATGAAATTTTAGATAAAAAGCTCAATGCAATGGGGCGTGGCGACTGGCTGCGCGAAGATTGTGCCGCGCAGCTTGATCCTACGCGCTGGACGATTGAACCCATGGAAGCATGGCGGCGCGTCAAAGCGTGGCAGCGCGTGCCAAAAACCGCCTTTTCACGTTTGCGCGAGCTTGCGGCATGGCGCGAGCGGGAGGCACAAGCCCGCGATTTGCCACGCCGCTGG
PROTEIN sequence
Length: 241
VSELSMNGLLQSQADFVSALATLAPSPVLALDTEFMRERSYRPQLCLIQLGNATQQVCVDPLHLEDLEPLGAQLADTRQIKLVHAAAQDLEVLHQRLGVLPAPLFDTQLAATLCGMGEQMGYANLIEQLLGVVLDKTSSRTDWSQRPLSAEQYRYALDDVRYLPEVYEILDKKLNAMGRGDWLREDCAAQLDPTRWTIEPMEAWRRVKAWQRVPKTAFSRLRELAAWREREAQARDLPRRW