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ar4r2_scaffold_42829_3

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38
Location: 1088..1270

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 64.0
  • Bit_score: 72
  • Evalue 1.70e-10
23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.190) similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 64.0
  • Bit_score: 71
  • Evalue 1.00e-10
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Thiocapsa marina 5811 RepID=F9UFV7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 64.0
  • Bit_score: 72
  • Evalue 1.20e-10

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Taxonomy

Thiocapsa marina → Thiocapsa → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGAGTAATAAACGCAAAGGTTTGATTTTTGAAGTCGATATCACAGGTTTCACCCACGAGGCGCGCGGTGTGGCGCACCACGAGGAGAAGGCGGTGTTTGTCGATGGCGCGTTGCCCGGCGAGCGGGTCAAGGTGCGCCTAACTAAGCCGCATCGTCGTTTCGATGAGGCCGAGGTGATTGAG
PROTEIN sequence
Length: 61
MSNKRKGLIFEVDITGFTHEARGVAHHEEKAVFVDGALPGERVKVRLTKPHRRFDEAEVIE