ggKbase home page

ar4r2_scaffold_312_27

Organism: ALUMROCK_MS4_SR1_33_49

near complete RP 44 / 55 MC: 3 BSCG 48 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 26929..28032

Top 3 Functional Annotations

Value Algorithm Source
dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627AF0 id=982989 bin=RAAC1_SR1 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC1_SR1 organism_group=SR1 similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 366.0
  • Bit_score: 264
  • Evalue 1.70e-67
dihydrouridine synthase TIM-barrel protein nifR3 similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 365.0
  • Bit_score: 252
  • Evalue 2.50e-64
tRNA-U20-dihydrouridine synthase {ECO:0000313|EMBL:EKD56447.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 379.0
  • Bit_score: 133
  • Evalue 8.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1104
ATGATAATCGGCCTCGCGCCAATGGATTGATTTACTGACTGTGCTTTCCGTCAAATCGTGAAAGAGATTTTTGATGTATATGGAGAAAAAAAATATGAGTTATGATTACGAACTGAGTTTATGAATGCTGATGGGTACATCATCAATCCTCCATGAGTGATTAAGCATTTATTGACGGACAAAGATCAGTCACCCGTCATCGCTCAAATATTTTGATCAGATGAAAAAATGTTGGTGAAATGTTTCGCTGATATCCAAAAAAAATACTTTTTGAATGTAGAATACAGAATTCAGAATGCAGAAAAAATTCAAAAAAATTCTATTAATTCTGAACTTTGAACTCTGAATTCTGAATTCAGTTTTGCGTGAATAGAATTGAATATGGGTTGTCCTGCGAGAAATGTTATGCATACAGGATGAGGAAGTGCATTATTGAGAGATAGAAAACAGACATTGAAAATCATAAAAAAACTTTCAGAAATCATGAAGACACCCTTTAGTATCAAGACAAGAACTGGGACAGACGAACATGATATACAAGAGCAAATGAAATTTCTTATCGAAGCAAGTACACATGTCAGTATGATAACTATTCATGGAAGAACAGTAAAGCAATGATATTCTGCTGACAGTAATTGGAATTTTGTCTATGAGCTCAAGAAAAAAGCCGATAAAAAATGCAAAGTAATAGGAAATGGTGGAATTAAAAATTACGAAGATATAGCAAGTCATTGCGAGTGAAACGAAGCAATCTTAGACTGAGTTATGATTGGTCAAGCAGCAATTGGCAACCCGCGAATTTTTACTCCTCACCTACCAAGTAGAGAAGAAATCAAAGCAACTATTTTGAAACATCTCGACTATATGATTAGCTATGAAAATTATTTTCAAGAACAGAAAGCGAAATATACAAGCATCTTAGTGATGCCAGAAAAACTAGAAATCAATGTAAAAAATCCACAAGCGATTACGCTTGCAGAGTTTAGAAAACACTTATTCCAATATGTGAAATGAATCCCGTGATCGAAGGAATTTAAGCAGAAGGTCAGTACGATAGTCGAATACAATTCGCTCGTCGAAGAGATTCAGAAATTTTTAGGTTAA
PROTEIN sequence
Length: 368
MIIGLAPMD*FTDCAFRQIVKEIFDVYGEKKYEL*LRTEFMNADGYIINPP*VIKHLLTDKDQSPVIAQIF*SDEKMLVKCFADIQKKYFLNVEYRIQNAEKIQKNSINSEL*TLNSEFSFA*IELNMGCPARNVMHTG*GSALLRDRKQTLKIIKKLSEIMKTPFSIKTRTGTDEHDIQEQMKFLIEASTHVSMITIHGRTVKQ*YSADSNWNFVYELKKKADKKCKVIGNGGIKNYEDIASHCE*NEAILD*VMIGQAAIGNPRIFTPHLPSREEIKATILKHLDYMISYENYFQEQKAKYTSILVMPEKLEINVKNPQAITLAEFRKHLFQYVK*IP*SKEFKQKVSTIVEYNSLVEEIQKFLG*