ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

ar4r2_scaffold_5209_3

Organism: ALUMROCK_MS4_Chloroflexi_56_44

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(1759..2292)

Top 3 Functional Annotations

Value Algorithm Source
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 177.0
  • Bit_score: 250
  • Evalue 2.30e-63
50S ribosomal protein L10 id=2465329 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 179.0
  • Bit_score: 208
  • Evalue 7.10e-51
rplJ; 50S ribosomal protein L10 similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 177.0
  • Bit_score: 192
  • Evalue 8.70e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC12_FULL_Chloroflexi_59_14_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 534
TTGGCACTCACTCGTGAACAAAAAGAAGCCGTAATCACCCGCTATGCAGAATGGCTGAAGAAAAGCCAGGCTGTGATGCTGGTTGAGTACACTGGTCTGAGCATGAAAGACCTGGATGCCATTCGCGCGAAAGTGCGCGACACTGGCGGCGAATTTCACATCTTAAAGAACACCCTTGCGCGGAAGGTACTGGAAGCCAACGGGATTAACGTCCCGGCTCACCTTACCAAGAAAAGCACCGCTGTTGCGTTCGCATTTAGCGACGCGGCAGGTACAGCAAAAGCGCTGGCTGATGCCACAAAAGGGATGGAAGTTGTGAAGTTGAAGGGCGGCTTGTTAGACAAACAAGTCCTGAACCCTGCCCAGGTAAAAGCATTGGCAGAACTGCCGCCTTTGCCCGTAATGCGCGCTCAATTGCTGGGCGTGCTACAAGCCCCCGCCGGGAAACTGGTCCGCACTATTGCCGAACCCGCGCGTTCTCTCGCTTCTGTCTTCCGGGCTTATACCGAAAAAGCTCAACAACCCGCCGCGTAA
PROTEIN sequence
Length: 178
LALTREQKEAVITRYAEWLKKSQAVMLVEYTGLSMKDLDAIRAKVRDTGGEFHILKNTLARKVLEANGINVPAHLTKKSTAVAFAFSDAAGTAKALADATKGMEVVKLKGGLLDKQVLNPAQVKALAELPPLPVMRAQLLGVLQAPAGKLVRTIAEPARSLASVFRAYTEKAQQPAA*