ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

ar4r2_scaffold_3309_1

Organism: ALUMROCK_MS4_Bacteriodetes_30_51

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 1..657

Top 3 Functional Annotations

Value Algorithm Source
ompA; OmpA family peptidoglycan-associated lipoprotein Tax=GWA2_Bacteroidetes_31_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 219.0
  • Bit_score: 284
  • Evalue 1.30e-73
Peptidoglycan-associated lipoprotein, OmpA family id=2126620 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 217.0
  • Bit_score: 265
  • Evalue 3.50e-68
ompA; OmpA family outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 215.0
  • Bit_score: 194
  • Evalue 3.70e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Bacteroidetes_31_9_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
TATGGTGGCAAAGATATTTATAAAGTTGTAAAATTACCAAACGATAAGTGGAGTAAAGCGATGAATTTAGGACCTATAATAAACACTCCTTACGACGAAGATGCACCTTTTATACAAGCCGATGGCGTAACATTGTTCTTTAGCTCAAAAGGACATATTAATATAGGAGGTTACGATATTTTTAAAACAACTAAAAATGAAAATGGGTTTTGGAGTTTTCCGGAAAATATGGGAAGTCCTATAAATTCTGTAGCAGACGATATATTTTTTGTTGCAAACCCCGAAGCAACAGAAGGTTATTTCTCAAGTAATAGAGAAGGCGGTTACGGAGAAACAGACATCTACAATGTTGAATTTCCAGAGGTTTTTACCGAAAATTTATTTTTAAAAGGGCGAGTTGAAAACGAAAAGACCAATTTACCTTTAAAAGCAATAATTACAATTGTAGATTACGATACAAAAGAGTTGCAAGGAATATACCGTACAAACGGAAATACTGGAAAATTTGTTATGGTTTTACTTCCTAAACGCCATTACAAACTAATTGTAGAAGCCGAAGGCTATCATAGTTTTATTGATGATATAGATATGACAGAAAAATTGAGAATGCAAGATTTATTTAAAAATATTAAAATGCAACAAATTAATAATGAATAA
PROTEIN sequence
Length: 219
YGGKDIYKVVKLPNDKWSKAMNLGPIINTPYDEDAPFIQADGVTLFFSSKGHINIGGYDIFKTTKNENGFWSFPENMGSPINSVADDIFFVANPEATEGYFSSNREGGYGETDIYNVEFPEVFTENLFLKGRVENEKTNLPLKAIITIVDYDTKELQGIYRTNGNTGKFVMVLLPKRHYKLIVEAEGYHSFIDDIDMTEKLRMQDLFKNIKMQQINNE*