ggKbase home page

ar4r2_scaffold_894_12

Organism: ALUMROCK_MS4_Halothiobacillus_neqpolitanus_60_18

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(8937..9656)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYS9_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 179.0
  • Bit_score: 221
  • Evalue 8.40e-55
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 179.0
  • Bit_score: 221
  • Evalue 2.40e-55
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillace similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 179.0
  • Bit_score: 221
  • Evalue 1.20e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGACCTTTGCTATGCCCGCCCGCATTTCGCTGTTTTCCGCCCTCCTCCTCGCCACCGTGCTGATTCACCCCGCGATCAGCCACGCAGCCAAGGCCGACCGCCAACAACCGATTGATGTGACCGCCAACCAAAAAGTCACCGACTACAAAAACGGCACCAGCACCTACACCGGCAATGTCGTCATCATTCAAGGCAGCCTCAAGGCCACCGGCAGCGAGGCCGTGGTGTATGTCAAAGACGGCCAGCTCACCCGCGCGGTGCTCACCGGCAGCCCGGCCACTTTTCAAGAACTGGATGACAAAGGCCAGCTCGTTAAAGGCCACGCCGACAACGCCAACTACTTGGCCACCGAACAAAAAGTCATCCTGACCGGCAATGCCCATCTGGAACGCAGCGGCGATGTCCTCGAATCGCCGCTGATTACCTACGACATGGCCGCCGAAGTGGTCAAAGCCGGGGGAAAACAAGGCGGCGAACGGGTGCATGTCGTGATTCAACCGCGCAAACCGGATGCCACGACCGCCCCGGCCAGCGAGGGCGCGAAAGCCCCGGACAAAACGGCGCCGGCAAAATCTGATTCAGGGAAATCCGAGCCGGAAAAAACCGCTCCAGAGAAATCCGCTCCAGAGAAATCCGCTCCAGAGAAATCCGCTCCAGAGAAATCTGATCCGGGGAAATCCGAGCAAGGAAAAACCGAGCAAGGGCAAACCACCCCATGA
PROTEIN sequence
Length: 240
MTFAMPARISLFSALLLATVLIHPAISHAAKADRQQPIDVTANQKVTDYKNGTSTYTGNVVIIQGSLKATGSEAVVYVKDGQLTRAVLTGSPATFQELDDKGQLVKGHADNANYLATEQKVILTGNAHLERSGDVLESPLITYDMAAEVVKAGGKQGGERVHVVIQPRKPDATTAPASEGAKAPDKTAPAKSDSGKSEPEKTAPEKSAPEKSAPEKSAPEKSDPGKSEQGKTEQGQTTP*