ggKbase home page

ar4r2_scaffold_8914_4

Organism: ALUMROCK_MS4_Thiomonas_64_15

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 2722..2991

Top 3 Functional Annotations

Value Algorithm Source
RNA chaperone Hfq n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625255 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 178
  • Evalue 4.00e-42
protein hfq similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 168
  • Evalue 1.20e-39
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 168
  • Evalue 5.80e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithiobacillus ferrivorans → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCCGGTCAACAAAAAGGGCAGATTCTTCAGGATCCTTTTCTCAATTTGCTGCGCAAGGAACACGTTCCCGTCGCCATCTATCTGGTCAACGGGATCAAGTTGCAGGGATTTGTCGAATCCTTCGATCAGTTCGTTGTTTTGTTGCGGAATAATGTCAGCCAAATGATTTACAAACATGCCATTTCTACGGTGGTTCCCGGTCGTGATGTGCGCTTGCCTTTGCCTGAGGGCGAAGGTGAGGTGACGGCGACAGAAGAAGAGGCCTGA
PROTEIN sequence
Length: 90
MAGQQKGQILQDPFLNLLRKEHVPVAIYLVNGIKLQGFVESFDQFVVLLRNNVSQMIYKHAISTVVPGRDVRLPLPEGEGEVTATEEEA*