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ar4r2_scaffold_3458_4

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial

partial RP 40 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2177..2812)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCK8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 186.0
  • Bit_score: 228
  • Evalue 6.10e-57
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC214 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 186.0
  • Bit_score: 228
  • Evalue 8.50e-57
algU; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 185.0
  • Bit_score: 225
  • Evalue 1.40e-56

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Taxonomy

marine gamma proteobacterium HTCC2143 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGTTATTCCGCCCCACGGACACAGTGCCGGGACGAAAAAAATCCTCCAAACTGCCCAGGCCGGATGCGCAATCCAGCGATCAGCAGCTTGTGGAGCTTGCCAAAGCGGGCGACTCGTATGCGTTTGAGCTCCTATTGCGCAAGTATCAGCATAAAGTCAGCAAGCTGATTATGCGCTATGTGCGCGATATGGATGAGGCGCTTGATCTTACACAGGAAACGTTTATCAAGGCATGGAAGGCCTTGCCTGGTTTTCGGGGTGAGTCTGCGTTTTACACCTGGCTCTATCGCATCGCAGTGAACACAGCGAAGAATTATCTGTCTACTGCTCATCAGCAGGCGCGCATGGTCGATCTGGATGCGGATGAAACCGATCAATATGGCGATACGCCGGGCTTGGTGACTATGGATACCCCAGAAAGCGTGATGAATGGCGCTGAGCTGCACAAGGTCTTGAAAAAGGCGCTCAGTGAGCTGCCGGAAGATTTGCGCTCGGCCATCACGCTACGCGAGTTTGAAGGCCTGAGTTATGAGGAAATTGCCGAAGTCATGGATTGCCCGATCGGCACGGTGCGCTCACGCATTTTTCGTGCGCGCGAGGCATTGGATAAGCATTTACAGGCTTTTATGGTTTAG
PROTEIN sequence
Length: 212
MLFRPTDTVPGRKKSSKLPRPDAQSSDQQLVELAKAGDSYAFELLLRKYQHKVSKLIMRYVRDMDEALDLTQETFIKAWKALPGFRGESAFYTWLYRIAVNTAKNYLSTAHQQARMVDLDADETDQYGDTPGLVTMDTPESVMNGAELHKVLKKALSELPEDLRSAITLREFEGLSYEEIAEVMDCPIGTVRSRIFRAREALDKHLQAFMV*