ggKbase home page

ar4r2_scaffold_4499_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial

partial RP 40 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 1..327

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YZT6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 108.0
  • Bit_score: 163
  • Evalue 1.60e-37
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Mari similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 106.0
  • Bit_score: 163
  • Evalue 1.30e-37
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 106.0
  • Bit_score: 159
  • Evalue 5.00e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Marinobacterium sp. AK27 → Marinobacterium → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATTGCCGAAGAGCTGGAGCTGCACGAATCCACCATTTCGCGGATCACCAGCAATAAATACATGCACACCCCCAAGGGCGTGGTGGAGTTCCGCTACTTCTTCTCCAGTCACGTCGCGACATCCGACGGCAATGATGCTTCGTCCACCGCGATTCGTGCCATGCTCAAACGCATCGTCGCCGCCGAGAATCCGCAAAAACCGCTCAGTGACAACCGTATTGCCGAAATGCTGGAAGCCGAAGGCATTCACGTCGCCCGCCGCACCTTGGCCAAATATCGTGAAGCCTTGGGCATACCACCTTCAAATGAACGCAAGCGTCCCGCCTGA
PROTEIN sequence
Length: 109
IAEELELHESTISRITSNKYMHTPKGVVEFRYFFSSHVATSDGNDASSTAIRAMLKRIVAAENPQKPLSDNRIAEMLEAEGIHVARRTLAKYREALGIPPSNERKRPA*