ggKbase home page

ar4r2_scaffold_4623_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial

partial RP 40 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 2..1285

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thio similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 427.0
  • Bit_score: 500
  • Evalue 3.10e-138
tRNA modification GTPase MnmE n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUH8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 427.0
  • Bit_score: 500
  • Evalue 2.20e-138
trmE; tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 432.0
  • Bit_score: 488
  • Evalue 1.40e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
AGTCTGTTGGGGGCGTTGCCCGCACCGCGACGTGCGCTGCATCGTGTCTTTCGTGACGCGCACGGCGAGGCGCTGGATGACGGCATTGCGCTGTATTTTCCCGCGCCGCACTCCTTCACCGGCGAAGACGTGCTCGAACTGCAAGGGCATGGCGGCATGGTGGTGCTGGATCGCGTGGTGCGCGCCTGCCTTGCCCAAGGCGCACGCCTTGCTCGCCCCGGCGAATTCTCCGAGCGTGCGTTTCTGAATGACAAGCTCGACCTGGCGCAAGCCGAAGCGATTGCTGACTTAATCGAAGCAGGCTCCGAGGCCGCCGCCAAGGCGGCGCTGGCTTCGCTGCAAGGCGCGTTCTCGCAGGAAGTGCATCGGCTCACCGAACGCCTGATCGCCCTGCGCATCTACATTGAGGCCGCGCTGGATTTTCCTGAAGAAGAAATCGACTTTCTTGCCGATGTAGGGCTGCTCACGCAAATTGATGAGCTGTTGCTGCAAGCCGCTGAGGTACGTCGCAGCGCACAGCAAGGCGCGTTGCTACGCGAAGGTTTGCACGTCGTCATCCTCGGCCGCCCGAATGCCGGAAAATCCAGTCTGCTCAATGCCTTATGCGGCTTTGAAGCGGCGATTGTCACCGACATCCCCGGCACCACGCGCGATGTGCTGCGTCAGCATCTTTCCCTCGACGGCCTGCCGATTCATCTGGTGGATACCGCCGGTCTGCGTGAAAGCGCTGACGTGGTGGAACAGGAAGGCATCCGCCGCGCTTGGCTGGAAGTCGAACGCGCCGACCGCATCCTGCTGGTAGTGGATGACCGTTACGGCATTGCGCCGGAAGACGCGGCGATTCTTGCGCGCCTGCCCGCCAAGCTTGGCCTGACCCTGGTGCGCAATAAAATCGACCTGAGCGGCGCCACGGCGGGCGAGCGTGTGCTGGAACACCTAGCCGACGCACCGGAGTATTTGCGGGGTCGTGCGGTGACTGAAATTGCGCTGTCCGCCAAACAGCACGACGGCCTGGAGCGCCTGCGCGAACATCTCAAAGCCTGCCTGGGCTACCAACCGGCGGAAGGCGGCATCTTCCTCGCCCGTCGCCGTCATCTCGATGCGCTGGAAAAGGCCGAAGCACACATGCAGCGTGCGCACGAATGCCTATTCAGCACCAAGGCAGGCGAGCTGGCCGCCGAAGAACTGCGCTACGCTCAACGCGCCTTGGGTGAAATTACCGGACAATTCACTGCTGATGATTTGCTGGGGCGGATATTTTCGAGTTTTTGTATTGGGAAATAG
PROTEIN sequence
Length: 428
SLLGALPAPRRALHRVFRDAHGEALDDGIALYFPAPHSFTGEDVLELQGHGGMVVLDRVVRACLAQGARLARPGEFSERAFLNDKLDLAQAEAIADLIEAGSEAAAKAALASLQGAFSQEVHRLTERLIALRIYIEAALDFPEEEIDFLADVGLLTQIDELLLQAAEVRRSAQQGALLREGLHVVILGRPNAGKSSLLNALCGFEAAIVTDIPGTTRDVLRQHLSLDGLPIHLVDTAGLRESADVVEQEGIRRAWLEVERADRILLVVDDRYGIAPEDAAILARLPAKLGLTLVRNKIDLSGATAGERVLEHLADAPEYLRGRAVTEIALSAKQHDGLERLREHLKACLGYQPAEGGIFLARRRHLDALEKAEAHMQRAHECLFSTKAGELAAEELRYAQRALGEITGQFTADDLLGRIFSSFCIGK*