ggKbase home page

ar4r2_scaffold_6126_3

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial

partial RP 40 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(1385..4387)

Top 3 Functional Annotations

Value Algorithm Source
Crispr-associated protein, Csn1 family (Fragment) n=3 Tax=mine drainage metagenome RepID=T1CFZ1_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 738.0
  • Bit_score: 1045
  • Evalue 0.0
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH21524.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 999.0
  • Bit_score: 1224
  • Evalue 0.0
crispr-associated protein, csn1 family similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 999.99
  • Bit_score: 927
  • Evalue 3.70e-267

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sedimenticola sp. SIP-G1 → Sedimenticola → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3003
CGCCTGCGCCGCCTGTTCAAGCGCGAAGGTTTGATTGCGAGCCATGCAGCCGAAGCCTTCGCCACGACGACATCCCCCTGGGAATTACGCGCCGAAGGACTGGAAAGCAAGCTCGAACCACATGAATGGGCAGCCACGCTTTACCACATCATCAAGCATCGTGGTTTTCAATCCAACCGCAAAAGCGAAGTTAAAGAAGACGAAAAAGCCGGGCAGATGCTCAACGGCGTATCGGCGAACCAGACGCGCATGAAAGAGGGCGGCTGGCGCACGATGGGCGAAATGGCGGCTCACGATGAAGCCTTGACAACAGCCAAACGCAACAAAGGCGGCGCATATACCCACACCTTTGCGCGTGCCGATCTTGAGGACGAATTACGCCTACTGTTTGCTGCGCAACGCGCCTTGGGCAACCCTCACGCCAGCGCAGATTTTGAGGTTGCTGTGCACGATCTGCTTATGGCGCGCAAGCCGACACTCTCGGGTAAGAACCTGCTCAAAATGGTTGGCAAATGCACCTTCGAACCCAGCGAGTACCGCGCCCCCAAGGCCAGCCACACCGCCGAACGCTTCGTATGGCTGACCCGCCTGAACAACACTCGCATTACCGGCCTAGGCGTGACCCGCGCTCTATCGGATGATGAGCGCCAAGCGTTAATTGATTTACCCTTCACGCAAGCCAAACTCACCTACAAACAAGCGCGCAAAGCCGCCAACTTGGCGGAGCAAGAGCGCTTTGTGGGGCTCGCCTATCGCGCCGACAAAGACCCCGAAAGCGCCGTGCTGTTCGAGGCCAAAGCCTTTCACAAACTGCGTAAAGCCTACGAAGATGCGGGGCTCAAAACCGAATGGGCACGCGACGCACACAACCCGGATCGACTGGATGCCCTCGCCTACGCGCAAACGGCTTACAAAGACGACCGGGAAGCGCGGGAATACCTTGCGCAACAAGGCATCGAATCCGCCATTATCGAAGCCGTATTAAATGTAAGTTTCAGCGACTTCATCCGCTTATCCATCAAAGCCTTGCGCAAAATCATCCCGCACATGAAAGCGGGAATGCGTTATGACGAAGCGGTGCTCGCCGCAGGCTACCAACACCACAGCGACCTGCACAAAGACAGCCCCAAAACCCGCCGCATCCCGCGTATCAATAAAGAAGACTTCCCCAACCCCGTGGTGTACCGCGCCCTTAATCAAGCGCGTAAATTGGTCAACGCCATTATTGACGAGTACGGCGCACCCACGCGGGTGCATATCGAACTGGCGCGGGATTTGAGTAAATCGTTTGACGAACGGCGCGACATCAAAAAAGAACAGGACAAATTCCGCGACAACAAAGAAAAGGCCGCCGAGAAATACCGCGAACTATTCCACCAGCCACCCAAAAAAGACCAACTCGACAAGCTGCGGCTCTACGACGAGCAAGACGGCAAATGTGCCTACAGCCTCAGCCCACTCGACTTAAGGCGACTGGATGAAGATGGTTATGTCGAAATCGACCATGCCCTACCGTACTCGCGCAGTTTTGATAACGGCATGAATAACAAGGCCTTGGTGCTGACTCATGTCAACCGCGACAAAGGCAATCAAACACCCTATGAATACCTCGGCGGCGCACACGGCGACCCACGCTGGCACCAGTTTGAAATCGCGGTGCGCAGCAACAAAAAATACCGCCAAGCCAAGCGCGACCGCCTATTACGCAAAGATTTCGGCGAAAAAGAAGCCGAAGGCTTCCGCGAGCGCAACCTCACCGATACCCGCTATATTGCCCGCGCCTTCAAGACCTTGGTTGAAAAGCATCTGCAATTGGCCGAAGACTCAAAAGCACAGCGCTGCGTCGTTGTATCCGGCCAACTAACCGCCTTTTTACGCGCCCGCTGGGGACTGAATAAAGTACGTGCCGATGGCGATTTACACCATGCGCTTGATGCCGCCGTGGTGGCCGCGTGCAGTCACAGCATGGTCAAACGCCTCTCCGATCACAGCCGTCACAAAGAACTTGAACAGGTGTGCAATGGCTACATCGACCCACAAAGCGGTGAAGTTCTCGACATTGCCGCCCTGCGCCGACTCGAAGATCACTTTCCAAAACCGTGGGCGCATTTCCGCGAAGAACTTCTGGCACATTTACACCCCGACCCCGCCTTGCAGCTTGAGCACCTCAGTGATGTAGATAAGGCGCACGCGAGATCTGTGCGCCCCATCCGTGTTTCACGTGCGCCACTGCGGCGCGGGACTGGGCAGGCGCATCAGGAAACCATTCGCTCCGCCAAGCGACTTGATGAAGGCTTGAGCAGCGTGAAAACCCCGCTTGAAAACCTCAAACTCAAAGACATCGAAAACATTATCGGCTTCGATGACCCACGTAATGAAAAACTCATCGCAGCCATCCGTGGGCGCCTGCAACAACACGGCGACGATGGCAAAAAAGCCTTCAAAGACAAGCTCTACAAACCCAGCAAGGAAGGCAAAACCGCCCCCGTGGTGCGCACCGTCAATCTTGCCAGCACACAAAAAAGCGGCCTCCCCGTGCGCGGCGGCATTGCCGCCAATGGCGACATGCTACGCGTGGATATTTTTACCGACGGGAAGAAGTTCTACGCCGTGCCGCTGTATGTGGCCGACTCGGTGAAAACACTCGAAAACCTGCCGAATCGAGCCGTGGTTGCATTCAAGCCCGAAGATGAGTGGACGCTCATGGATGCCGACAAGGGCTATCGCTTTTTGTTTAGCCTGCATCCGAATGATTGGGTGCGCGTGCAACAAAAAGGCAAGCCCATGTTGGAGGGCTATTTTGGCAGTGCGCATCGCGGCACAGGTAACATCAATATTTGGGCACATGACCGAAATCGTTCCATTGGCAAAGACGGGCTGATCGAAGGCATCGGCATTAAAACCGCCCTCAGCGTAGAAAAATTCCACGTCGACATGCTCGGTCGCCTCTACCCGGTGAAGCAGGAAATCCGCCAGCCGCTTAGCTACAAGCGCAGGGGCTAA
PROTEIN sequence
Length: 1001
RLRRLFKREGLIASHAAEAFATTTSPWELRAEGLESKLEPHEWAATLYHIIKHRGFQSNRKSEVKEDEKAGQMLNGVSANQTRMKEGGWRTMGEMAAHDEALTTAKRNKGGAYTHTFARADLEDELRLLFAAQRALGNPHASADFEVAVHDLLMARKPTLSGKNLLKMVGKCTFEPSEYRAPKASHTAERFVWLTRLNNTRITGLGVTRALSDDERQALIDLPFTQAKLTYKQARKAANLAEQERFVGLAYRADKDPESAVLFEAKAFHKLRKAYEDAGLKTEWARDAHNPDRLDALAYAQTAYKDDREAREYLAQQGIESAIIEAVLNVSFSDFIRLSIKALRKIIPHMKAGMRYDEAVLAAGYQHHSDLHKDSPKTRRIPRINKEDFPNPVVYRALNQARKLVNAIIDEYGAPTRVHIELARDLSKSFDERRDIKKEQDKFRDNKEKAAEKYRELFHQPPKKDQLDKLRLYDEQDGKCAYSLSPLDLRRLDEDGYVEIDHALPYSRSFDNGMNNKALVLTHVNRDKGNQTPYEYLGGAHGDPRWHQFEIAVRSNKKYRQAKRDRLLRKDFGEKEAEGFRERNLTDTRYIARAFKTLVEKHLQLAEDSKAQRCVVVSGQLTAFLRARWGLNKVRADGDLHHALDAAVVAACSHSMVKRLSDHSRHKELEQVCNGYIDPQSGEVLDIAALRRLEDHFPKPWAHFREELLAHLHPDPALQLEHLSDVDKAHARSVRPIRVSRAPLRRGTGQAHQETIRSAKRLDEGLSSVKTPLENLKLKDIENIIGFDDPRNEKLIAAIRGRLQQHGDDGKKAFKDKLYKPSKEGKTAPVVRTVNLASTQKSGLPVRGGIAANGDMLRVDIFTDGKKFYAVPLYVADSVKTLENLPNRAVVAFKPEDEWTLMDADKGYRFLFSLHPNDWVRVQQKGKPMLEGYFGSAHRGTGNINIWAHDRNRSIGKDGLIEGIGIKTALSVEKFHVDMLGRLYPVKQEIRQPLSYKRRG*